Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1257 ATGGCGTCAAAATCATTCAAGCCTAGTCGATTATCTCAATCAAGTTCAACAAAGTCTGATGCAACTGAAGGCCACAAGCATGGTGTACCTCCATCTGTGACATTTGGCCGGAGAACTTCCTCAGGCCGCTATGTCAGTTACTCCAGAGATGATCTTGACAGTGAGCTAGGGAGTACTGACTTCGCAAATTATACAGTGCATTTGCCACCAACTCCCGATAACCAACCTATGGATCCATCAATTTCGCAGAAAGTTGAGGAGCAATATGTGTCAAATTCACTCTTCACAGGTGGATTCAACAGTGTTACAAGAGCCCATCTGATGGATAAGGTGATAGATTCTGAGGCAAACCATCCACAGATGGCTGGGGCAAAAGGATCTTCGTGTGCAATTCCTGGTTGTGATTCTAAGGTGATGAGTGATGAACGTGGCGTTGATATTCTTCCTTGTGAGTGTGATTTTAAGATTTGTAGGGATTGCTATATAGATGCAGTAAAAACAGGAGGTGGGATATGCCCAGGATGCAAGGAGCCATATAAGAACACAGAACTAGATGAAGTGGCTGTTGATAATTCACGTCCCCTTCCACTTCCTCCACCGAGTGGAATGTCTAAAATGGAGAGGAGATTGTCCTTGATGAAGTCAACGAAATCAGCATTAATGAGGAGCCAAACTGGAGACTTTGATCACAATAGGTGGCTCTTTGAAACAAAGGGGACCTATGGCTATGGCAATGCAATATGGCCAAAGGAAGGAGGTTTTGGAAATGGAAAAGAGGACGATGTTGCCGAGCCAACTGAGTTGATGAACAGGCCCTGGAGGCCACTTACTCGGAAACTGAAGATACCTGCTGCTGTTCTGAGCCCATATCGTCTGCTAATCCTTATTCGTTTGGTTGTCCTGGTGCTGTTCCTGATGTGGAGAGTCAAGCACCAAAATACTGATGCAATCTGGCTGTGGGGCATGTCAGTTGTTTGTGAGATATGGTTTGCCTTTTCCTGGCTTCTAGATCAACTGCCCAAACTATGCCCTGTAAATCGTTCCACAGATCTTAATGTTCTGAAGGAGAAGTTTGAGACACCAACTCCTAACAATCCAACAGGAAAGTCTGATCTTCCAGGCATAGATGTCTTTGTGTCTACTGCTGATCCTGAGAAGGAACCACCTCTTGTCACTGCAAACACCATATTGTCTATTTTAGCTGCTGATTACCCTGTTGAGAAGCTTTCTTGCTATGTTTCTGATGATGGAGGTGCACTTCTAACTTTTGAGGCAATGGCCGAAGCTGCCAGCTTTGCTAATGTATGGGTTCCCTTCTGCCGGAAACATGATATAGAGCCCAGGAATCCTGAATCATACTTCAACTTAAAGAGAGACCCTTACAAGAACAAAGTGAGGCCAGATTTTGTCAAGGATCGAAGACGGCTGAAGCGTGAGTATGACGAGTTCAAGGTTAGGATCAATAGTCTGCCTGACTCTATCCGTCGTCGGTCAGATGCCTACCATGCCAGAGAAGAAATCAAGGCCATGAAACTTGAGAGACAAAACAAGGAAGATGAACCTATAGAACCTGTAAAGATTCCAAAAGCAACATGGATGGCTGATGGAACTCATTGGCCAGGAACTTGGTTAAATCCTACATCTGAGCACACAAGGGGAGACCATGCCGGTATAATTCAGGTGATGTTAAAACCTCCTAGTGATGATCCTCTTCTCGGAAGTGATGATGAGACAAAGCTCATTGACCTGACTGATGTTGATATCCGACTTCCTCTTCTTGTTTATGTTTCTCGAGAGAAGCGTCCAGGCTATGATCACAACAAAAAGGCAGGGGCCATGAATGCTTTGGTTCGAGCCTCAGCTGTAATGTCTAATGGTCCTTTTATACTCAATCTTGATTGTGACCACTATATCTACAACTCCAAGGCAATGAGGGAAGGCATGTGCTTTATGATGGATCGTGGAGGTGACCGCCTCTGTTATGTCCAGTTCCCCCAAAGGTTTGAGGGGATTGACCCCTCTGACAGATATGCTAATCACAACACTGTCTTCTTTGACGTCAACATGCGAGCCCTTGATGGACTTCAAGGGCCAGTCTATGTGGGGACTGGGTGCCTTTTCAGACGCATTGCGCTTTATGGTTTTGACCCACCACGCTCTAAGGAGCACCACCCAGGTTGTTGTAGTTGCTGCTTTGGCCGTCAGAAGAAGCTTGCATCAATGGCAAGCACCCCCGAAGAGAACCGTGCACTAAGGATGGGTGATTCTGATGATGAAGAAATGAATCTATCTCTGTTCCCTAAGAAGTTTGGAAATTCAACTTTCCTCATTGACTCAATCCCAGTGGCAGAGTTCCAAGGCCGGCCACTTGCTGATCACCCTGCCGTGAAAAATGGACGCCCACCTGGTGCTCTCACCATACCTCGTGATCTTCTTGATGCATCAACTGTGGCAGAGGCCATCAGTGTCATCTCATGTTGGTATGAGGACAAGACTGAGTGGGGACAGCGTGTTGGATGGATCTATGGTTCAGTTACTGAGGATGTGGTCACTGGGTATAGGATGCACAATAGGGGATGGAAATCAGTTTACTGTGTGACCAAGCGTGACGCCTTCCGTGGAACCGCACCCATCAATCTCACTGACAGGCTGCATCAGGTCCTTAGATGGGCTACTGGCTCGGTTGAAATATTCTTCTCTCGGAACAACGCCCTCTTAGCTAGCCCAAAAATGAAACTTCTTCAACGGATCGCGTACCTCAACGTTGGAATTTACCCATTCACTTCCATATTTCTCATTGTTTACTGCTTTCTTCCTGCACTATCCCTCTTTTCTGGCCAGTTCATTGTGCAGACCCTCAATGTCACTTTTCTTTCTTATCTCTTGGGCATCACTGTGACTTTGTGCATGCTTGCAGTGCTTGAAATTAAGTGGTCTGGCATTGAGTTGGAAGAATGGTGGAGAAATGAGCAGTTCTGGTTGATTGGAGGGACCAGTGCCCATCTAGCTGCAGTGCTTCAGGGTTTGCTCAAAGTCATAGCAGGCATTGAAATCTCGTTCACATTGACTTCAAAATCTGCTGGTGATGATGTAGATGATGAGTTTGCTGATCTCTACACTGTCAAATGGACATCCCTCATGATACCACCAATCACAATCATGATGGTCAACTTGATAGCTATCGCCGTTGGAGTTAGCCGAACCATATACAGTGTCATCCCGCAATGGAGCCGTCTAATAGGTGGTGTTTTCTTCAGTTTCTGGGTCTTGGCTCATCTCTACCCTTTTGCAAAAGGTTTGATGGGAAGGAGAGGGAGGACACCTACCATTGTTTTTGTATGGTCAGGCCTCATAGCAATCACAATCTCTCTTCTGTGGGTGGCTATCAATCCCCCTGCTGGTTCTAACCAAATTGGGGGTTCTTTCCAGTTCCCATGA 3438 0.4607 MASKSFKPSRLSQSSSTKSDATEGHKHGVPPSVTFGRRTSSGRYVSYSRDDLDSELGSTDFANYTVHLPPTPDNQPMDPSISQKVEEQYVSNSLFTGGFNSVTRAHLMDKVIDSEANHPQMAGAKGSSCAIPGCDSKVMSDERGVDILPCECDFKICRDCYIDAVKTGGGICPGCKEPYKNTELDEVAVDNSRPLPLPPPSGMSKMERRLSLMKSTKSALMRSQTGDFDHNRWLFETKGTYGYGNAIWPKEGGFGNGKEDDVAEPTELMNRPWRPLTRKLKIPAAVLSPYRLLILIRLVVLVLFLMWRVKHQNTDAIWLWGMSVVCEIWFAFSWLLDQLPKLCPVNRSTDLNVLKEKFETPTPNNPTGKSDLPGIDVFVSTADPEKEPPLVTANTILSILAADYPVEKLSCYVSDDGGALLTFEAMAEAASFANVWVPFCRKHDIEPRNPESYFNLKRDPYKNKVRPDFVKDRRRLKREYDEFKVRINSLPDSIRRRSDAYHAREEIKAMKLERQNKEDEPIEPVKIPKATWMADGTHWPGTWLNPTSEHTRGDHAGIIQVMLKPPSDDPLLGSDDETKLIDLTDVDIRLPLLVYVSREKRPGYDHNKKAGAMNALVRASAVMSNGPFILNLDCDHYIYNSKAMREGMCFMMDRGGDRLCYVQFPQRFEGIDPSDRYANHNTVFFDVNMRALDGLQGPVYVGTGCLFRRIALYGFDPPRSKEHHPGCCSCCFGRQKKLASMASTPEENRALRMGDSDDEEMNLSLFPKKFGNSTFLIDSIPVAEFQGRPLADHPAVKNGRPPGALTIPRDLLDASTVAEAISVISCWYEDKTEWGQRVGWIYGSVTEDVVTGYRMHNRGWKSVYCVTKRDAFRGTAPINLTDRLHQVLRWATGSVEIFFSRNNALLASPKMKLLQRIAYLNVGIYPFTSIFLIVYCFLPALSLFSGQFIVQTLNVTFLSYLLGITVTLCMLAVLEIKWSGIELEEWWRNEQFWLIGGTSAHLAAVLQGLLKVIAGIEISFTLTSKSAGDDVDDEFADLYTVKWTSLMIPPITIMMVNLIAIAVGVSRTIYSVIPQWSRLIGGVFFSFWVLAHLYPFAKGLMGRRGRTPTIVFVWSGLIAITISLLWVAINPPAGSNQIGGSFQFP* 1146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1257 1145 Pfam Cellulose synthase 375 1135 IPR005150 GO:0016020|GO:0016760|GO:0030244
Dod02g1257 1145 MobiDBLite consensus disorder prediction 1 19 - -
Dod02g1257 1145 SUPERFAMILY Nucleotide-diphospho-sugar transferases 390 716 IPR029044 -
Dod02g1257 1145 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 574 716 IPR029044 -
Dod02g1257 1145 PANTHER CELLULOSE SYNTHASE-LIKE PROTEIN D3 36 1143 - -
Dod02g1257 1145 Coils Coil 500 520 - -
Dod02g1257 1145 SUPERFAMILY RING/U-box 113 183 - -
Dod02g1257 1145 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 112 193 IPR013083 -
Dod02g1257 1145 Pfam RING/Ubox like zinc-binding domain 131 180 - -
Dod02g1257 1145 MobiDBLite consensus disorder prediction 1 39 - -
Dod02g1257 1145 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 36 1143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1257 Dod-Chr2 15248585 15254069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1257 1 1145 Glycosyltransferase AT3G03050 84.970 0.0 2051
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1257 K20924 - gmx:100792604 2240.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2649 03 57996765 58000927 Dod02g1257 02 15248585 15254069 ECH
Dod02g1257 02 15248585 15254069 Dod02g1257 02 15248585 15254069 ECH