Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g2489 ATGGTGGATAATAAACCAATGAGCATTCACAGAACCCGTTTTCCTTTCTCTGTTACCAAACTCCTCTTATGGTCCCTCGTCTCCTTAACTTTCATAGTCTTCTTCTTCGTCGGATCTCCTCCAACCACCACCACCACCTCCACCCCCACCCGCCGCTCCCTTCGCGGCGGCCCTCACTGGGAGACCTCCGTCCGCCACTCCGCCACCCCGTCAGGACCCAACGGCCTCCGAGTCCTCGTCACCGGCGCCGCCGGCTTCGTCGGGACCCACGTCTCCCTCGCCCTGAAGCGCCGCGGTGACGGCGTCGTTGGCGTCGACAACTTCAACCGCTACTATGACCCATCCCTGAAGCACGCACGCGCCGATCTCCTCACGCGCGAGGGTGTCTTCATCGTCGAAGGTGATATCAACGACTCTTCGCTCTTGAAATCGCTCTTCAAGGTCGTGAAGTTCACGCACGTGATGCACCTCGCAGCACAAGCTGGTGTTCGCTACGCCATGAAGAACCCTTCGTCTTATATCCAAAGCAACATTGCTGGTCTCGTTAATCTTCTCGAAGTATGCAAGAGCGTGAATCCTCAACCTGCTGTTGTGTGGGCTTCTTCTAGCTCGGTTTATGGGCTCAACTCTAAGGTACCATTTTCCGAGAAAGATCGAACGGATCAGCCAGCGAGTTTGTATGCTGCGACTAAGAAAGCTGGTGAAGAGATTGCACACACTTACAATCATATCTATGGTCTTTCCATCACTGGGTTGAGGTTCTTCACTGTTTATGGTCCTTGGGGAAGACCAGACATGGCTTATTTCTTCTTCACTAGGGATATTCTGAAGGGGAAGCAGATTCAGATCTTTGAAGGGCCTGATCATCGTTCTGTTGCGAGGGATTTTACTTACATTGATGACATTGTGAAGGGTTGTTTGGGGGCTTTGGATACTGCTGGGAAGAGCACTGGGAGTGGTGGGAAGAAGAGTGGACCTGCGCAGTTGAGAGTGTTCAATCTTGGGAACACTTCTCCTGTTCAGGTTGGGAAGCTGGTGAGTATATTGGAGAAGTTGTTGAAGGTTGATGCTAAGAAGAAGGTGATGCCGATGCCGAGGAATGGGGATGTGGTTTACACGCATGCTGATATAAGCCTTGCGACGAAGGAGATTGGGTATAAGCCCACCACGGATTTGGAAACGGGTTTGAGAAAGTTTGTGAATTGGTATTTGGAGTACTATAATTCATCTGATGAGGCGAAGAAAGGTAAGAGTGCTGCTTGGTGA 1266 0.5134 MVDNKPMSIHRTRFPFSVTKLLLWSLVSLTFIVFFFVGSPPTTTTTSTPTRRSLRGGPHWETSVRHSATPSGPNGLRVLVTGAAGFVGTHVSLALKRRGDGVVGVDNFNRYYDPSLKHARADLLTREGVFIVEGDINDSSLLKSLFKVVKFTHVMHLAAQAGVRYAMKNPSSYIQSNIAGLVNLLEVCKSVNPQPAVVWASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGEEIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTRDILKGKQIQIFEGPDHRSVARDFTYIDDIVKGCLGALDTAGKSTGSGGKKSGPAQLRVFNLGNTSPVQVGKLVSILEKLLKVDAKKKVMPMPRNGDVVYTHADISLATKEIGYKPTTDLETGLRKFVNWYLEYYNSSDEAKKGKSAAW* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g2489 421 PRINTS Nucleotide sugar epimerase signature 329 344 - -
Dod03g2489 421 PRINTS Nucleotide sugar epimerase signature 369 386 - -
Dod03g2489 421 PRINTS Nucleotide sugar epimerase signature 294 309 - -
Dod03g2489 421 PRINTS Nucleotide sugar epimerase signature 104 120 - -
Dod03g2489 421 MobiDBLite consensus disorder prediction 42 73 - -
Dod03g2489 421 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 73 409 IPR036291 -
Dod03g2489 421 Gene3D - 76 409 - -
Dod03g2489 421 PANTHER EPIMERASE-RELATED 2 411 - -
Dod03g2489 421 Pfam GDP-mannose 4,6 dehydratase 79 398 IPR016040 -
Dod03g2489 421 PANTHER UDP-GLUCURONATE 4-EPIMERASE 2-RELATED 2 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g2489 Dod-Chr3 56413612 56418787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g2489 9 413 Miscellaneous Gene Families AT4G00110 75.795 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g2489 K08679 - gmx:100819586 631.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g2489 03 56413612 56418787 Dod02g1008 02 12766326 12768860 ECH
Dod03g2489 03 56413612 56418787 Dod03g2489 03 56413612 56418787 ECH