Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1008 ATGGACGACCACATAGGAATACCCTCAACACCAGGCAAATTGAAACCAGAAAAATACCAACCCTTCAATTACTACATTCACCGCCTCAGATTATCAAAACTCACCCTATGGTCCTCCATCTTCCTCGCCTTCATCCTCTTCTTCTTCATCCTCTCCCCTCCCTCCTCCTCCTCCTCCGCCACCACCTCCACCCCCGCCACACGCCGCCTCGGCGACTCATGGGGCGGCCACGACTGGGAAAAGCGCGTGAGCAAGTCCGCCCGCAAGAACTCCGCCTCTGGCCTCACCGTCCTCGTCACCGGCGCCGCCGGCTTCGTCGGCTGCCACGTGTCCCTCTCCCTCAAGCGGCGCGGCGACGGCGTCCTCGGCCTCGACAACTTCAACCGCTACTACGACCCGAACCTCAAACGCGCCCGCCAGAAGCTCCTCTCACGCGCCGGCGTCTTCGTCGTCGACGGCGACATCAACGACGCCGCCCTCCTCCGCAAGCTCTTCGACGTCGTCCCCTTCACCCACGTCATGCACCTCGCCGCCCAGGCCGGCGTCCGCTACGCTATGCAGAACCCTAGCTCCTACGTTCACAGCAACGTCGCTGGGTTCGTGAACCTTCTAGAAGCTTCCAAATTGGCGAACCCGCAACCCGCGATCGTTTGGGCCTCTTCGAGTTCCGTTTACGGGCTCAATTCCAAGGTACCCTTTTCGGAAAAGGACAGAACTGACCAACCCGCAAGCCTATATGCTGCTACCAAGAAAGCCGGTGAAGCCATTGCTCATACCTATAACCATATCTATGGGCTCTCCATTACTGGGTTGCGGTTTTTCACTGTTTATGGGCCTTGGGGTAGGCCTGACATGGCTTATTTCTTTTTCACGAAGGATATTCTGAAGGGGAAGCAGATCACTGTGTTTGAGGCTGCTGATGGTGGAACCGTTGCGAGGGATTTCACTTACATTGATGATATTGTGAAGGGGTGTTTGGGGGCTTTGGATACTGCTAAGAAGAGTACTGGGAGTGGTGGGAAGAAGAAGGGGCCTGCGCAGTTTAGGATTTATAATTTGGGGAATACTTCGCCGGTGCCGGTGAGTGAGCTTGTGAGTATATTGGAGAAGCTTTTGAAGGTGAAGGCTAAGAGGAAGGTGATGCCTATGCCAAGGAATGGCGATGTTCAGTTCACGCATGCCAATATTACCAAAGCGCATAGAGAGATTGGTTACATGCCAACCACTGATTTGGAGACTGGGCTCAGGAAGTTTGTCAGGTGGTATCTTGAATTTTACTCTGCCTCCTCTAAGAAGAAGGGTGCTTGGTGA 1311 0.5469 MDDHIGIPSTPGKLKPEKYQPFNYYIHRLRLSKLTLWSSIFLAFILFFFILSPPSSSSSATTSTPATRRLGDSWGGHDWEKRVSKSARKNSASGLTVLVTGAAGFVGCHVSLSLKRRGDGVLGLDNFNRYYDPNLKRARQKLLSRAGVFVVDGDINDAALLRKLFDVVPFTHVMHLAAQAGVRYAMQNPSSYVHSNVAGFVNLLEASKLANPQPAIVWASSSSVYGLNSKVPFSEKDRTDQPASLYAATKKAGEAIAHTYNHIYGLSITGLRFFTVYGPWGRPDMAYFFFTKDILKGKQITVFEAADGGTVARDFTYIDDIVKGCLGALDTAKKSTGSGGKKKGPAQFRIYNLGNTSPVPVSELVSILEKLLKVKAKRKVMPMPRNGDVQFTHANITKAHREIGYMPTTDLETGLRKFVRWYLEFYSASSKKKGAW* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1008 436 Gene3D - 95 428 - -
Dod02g1008 436 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 93 427 IPR036291 -
Dod02g1008 436 Pfam NAD dependent epimerase/dehydratase family 97 334 IPR001509 -
Dod02g1008 436 PANTHER UDP-GLUCURONATE 4-EPIMERASE 5 3 433 - -
Dod02g1008 436 PANTHER EPIMERASE-RELATED 3 433 - -
Dod02g1008 436 MobiDBLite consensus disorder prediction 55 74 - -
Dod02g1008 436 MobiDBLite consensus disorder prediction 55 69 - -
Dod02g1008 436 PRINTS Nucleotide sugar epimerase signature 313 328 - -
Dod02g1008 436 PRINTS Nucleotide sugar epimerase signature 348 363 - -
Dod02g1008 436 PRINTS Nucleotide sugar epimerase signature 123 139 - -
Dod02g1008 436 PRINTS Nucleotide sugar epimerase signature 388 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1008 Dod-Chr2 12766326 12768860 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g1008 1 431 Miscellaneous Gene Families AT4G00110 74.083 0.0 657
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1008 K08679 - gmx:100788035 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1008 02 12766326 12768860 Dod02g1008 02 12766326 12768860 ECH
Dod03g2489 03 56413612 56418787 Dod02g1008 02 12766326 12768860 ECH