Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1471 ATGCGCTCAGGAGCTTGTACATTGCAGCAGACCCTCACAGCGGAGGCTGCTTCAGTACTGAAGCACTCTCTTGGGCTGGCACGCAGGAGGGGCCATGCACAGGTCACCCCTCTGCATGTTGCTGCCACCCTGCTGAGCCTGAGAGCCAGTTCCCTAAGAAGGGCTTGCCTCAAGTCTCAGCAACCGGAACCGCAACTACAACAACAACAACACCCTCTTCAGTGTAGGGCACTTGAGCTTTGCTTCAATGTGGCACTCAACAGGCTCCCAACAACACCTGGCCCTTTGCTTCATTCCCAGCCTTCTCTCTCCAATGCACTCATTGCTGCACTCAAGAGAGCACAGGCTCACCAGAGAAGGGGCTGCATTGAGCAGCAGCAGCAGCAGCCGCTCCTCACCATCAAGGTTGAGCTTGAACAGCTCATCATATCAATCCTTGATGATCCAAGTGTCAGCAGGGTAATGAGAGAGGCTGGTTTCTCCAGCACTGCTGTTAAGAACAACATAGAGGACTCTTCAGGAGCTTCTTCTGTCTTCCAGTGTTACAACAGCTCTGGTGGTGGTGTTTTCTCTTCTCCTTGCTCACCTTCTCCCAGTGAGAACCAAAGAGAAAGCACTTTGAGGCAGACACATTTCGTGGCTTCTTATGCTTCTGAGTATGCTCCAGCGCTGTTTTCACCACAGAAGAAGGCCTCAGTGTACCCCATCACTGAGTCTGGTTGTTCCGAGGAAGATATCAAGGCGGTTCTGGATGTGCTCTTGAGGAAGAAGAAGAGGAACACTGTGATAGTTGGTGACTCAGTGTCACTAACCGAAAGCCTTGTTGGGGAGCTAATAGGGAAGCTGGAAAGAGGAGATGTACCTGATGAGTTGAAGTCCACTCATTTCATAAAGTTTCAGTTTGCACCAGTTTCTTTGAGGTTCATGAAAAGGGATGAAGTGGAAACGAGCCTCTCAGCACTGAAGAGAAAGGTGGATTCTGTTGCTTCAGGAGGAGGAGGGGGAGCCATCTTCTATGTTGGGGACCTGAAGTGGACAGTGGAGGGTGAAAGAGAAGGTGGGGGTTTCAACCAGCAGGATGGGGAAGTTTCTGGTTACAATCCAGTTGATCATCTGGTTGCAGAAATGGGAAAGTTGTTTGGTGAGCAGGGAAACTCCAACTCTAAGCTGTGGCTAATGGGGACAGCAAGTTACCAAACTTACATGAGAGGTCAAATGAGGCAACCCCCTCTTGAGACTCAGTGGGCTCTTCAGGCTGTTCCTGTTCCATCAGCTGGACTTGGCTTGACTCTCCATGCTTCTAGTGTCTATGATTCAAAGATAAGCATTTCGCAGAACCAATCCCATATTTTGGAAACAAAGCTCTTCAGCAACAAGGAGGAGCATGAGAAGCTCAGTTGTTGTGAAGAATGTGCATCCAATTACGAAAACGAAGCTCAGTTGTTCAAACCAGGCCAGAAGAAACTGTTGCCTTCCTGGCTTCAGTCTCATAGCACCGAAGGCCATCAAAAGGATGAACTGGCTCAGTTGAAGAGAAAATGGAATAGGCTATGCCACTTTCTCCACCAGAGCAAACATCCTCAGAACCATTGGAGCAACGCTTTATATGGCAATCATCACAGTTCAAATGCAAAGATCTACCCTTATAATTCTTTATACCCCTGGTGGCCAAACCAAAGCAATGTCTTCCCAGATTCAAGTTCCATATCTTTTGCTGATTCCGCTATTAAGCCTGCTCATAGCTCCAACCTTGTGCCCCGGTTCAGGCGCCAACAATCATGCACCATTGAGTTCAATTTCAGCGAGGTAACTCAGAAAAACCAAGCAACAGATGCTACAACAGCAACAGCAACAACAACCACCACCACCTTGGATTCTCTAAAGGGCATGGAAGGTAAAGAAGTAAAGATTACTCTTGCTCTTGGAAATTCAACATTCGGTGGTTCAGGGCAAACGGTGGAAAACATAACTGATACAACACTACTACGAAGAGCTCATGTTTGTAAACTGTTGCAGGAGAATGTGCCATGGCAATCTGAAACACTTCCTTCAATAGCAGAGGCCTTGGTTGTTTCCAAACCAGCAAAGCAATGTTCTACTTGGTTTCTTTTGCAGGGAAATGACTCTGTTGGTAAAACAAGGTTGGCACTAGCCATTGCAGAATCGGTTTTCGGATCAGCTGATTTGCTCCTTCACTTGGACATGAGAAAATTGGAGGATTCAGCAACCCCATTTAATGAAATTCTGGCAGGATCACTGAAAACCAATGAAAAGATTGTGGTTTTAGTTGAAGATGTTGACTTTGCTGATCCCCAGTTCAAATTCCTTGCAGATGAGTTTGGGACATCAAAGTTTGGAAATTTAAGTGGAAAGTATGAGAATTCAGGACAGGCAATATTCATCTTGACTAGTGGTGGAACTAGAATCAATGAGGAGAAGAACAAGGACTCAGTGATGAGGTTGGTGTTGAAGGTGAGTGAAACCAAGGCCACATTGGAGTCATCATCACCTTGTTTGGGACAAAAGAGAAGGGCTGAACTGGACTTGTTTGGAAAGATCAAGAACAGAAGGATTGAAGAGAATGATGAAGAGGGTGTGTTGATTTCTGAGCAATGGAATAACAGAAAGAAAGACTTTTCAAGGCAGTCAAGTTTCAACACTCTTGACTTGAACATGAAAGCTGATGATGATGATGATGATGATGGGGAATACAAAGGAGGGGAAAGTAGCCCCATTTCAAGTGATTTGACTGGAGAAGCTATAGCTGATAATAACCTGAACTCGATTGTGTTTCTTGACTCAATTGAGAACAGGTTTGAGTTCAATCAAAGTCCAGCTAGGGAGAAGGAGAAGAAAGAGCTTTTTTCTTCCAAGATCAAGGGGTCCTTTGAGGAGGTTTGTGGGAGGCAAAACCTGGTGAACTTTACTGTAGATGAGAGGGTGATAGAGGAAATTGGTGTTAGGTGTGGTTCTTTTACTAACAGCATGTTTGAGAAATGGCTGAAAGACATTTTTCAAAGCAGCTTATTACAGACAGTTAACTTTGATGATGGGAAGGAGGGTATAGTTTTTACACTTTGTTGGGGTGGTAAAGGTGATAGAAAAATGGATAGTGGTTTCATGGGTTCATGTTTGCCCAAGGGTATCCAAGTTAACTACTTCATGGATATTTGA 3174 0.4543 MRSGACTLQQTLTAEAASVLKHSLGLARRRGHAQVTPLHVAATLLSLRASSLRRACLKSQQPEPQLQQQQHPLQCRALELCFNVALNRLPTTPGPLLHSQPSLSNALIAALKRAQAHQRRGCIEQQQQQPLLTIKVELEQLIISILDDPSVSRVMREAGFSSTAVKNNIEDSSGASSVFQCYNSSGGGVFSSPCSPSPSENQRESTLRQTHFVASYASEYAPALFSPQKKASVYPITESGCSEEDIKAVLDVLLRKKKRNTVIVGDSVSLTESLVGELIGKLERGDVPDELKSTHFIKFQFAPVSLRFMKRDEVETSLSALKRKVDSVASGGGGGAIFYVGDLKWTVEGEREGGGFNQQDGEVSGYNPVDHLVAEMGKLFGEQGNSNSKLWLMGTASYQTYMRGQMRQPPLETQWALQAVPVPSAGLGLTLHASSVYDSKISISQNQSHILETKLFSNKEEHEKLSCCEECASNYENEAQLFKPGQKKLLPSWLQSHSTEGHQKDELAQLKRKWNRLCHFLHQSKHPQNHWSNALYGNHHSSNAKIYPYNSLYPWWPNQSNVFPDSSSISFADSAIKPAHSSNLVPRFRRQQSCTIEFNFSEVTQKNQATDATTATATTTTTTLDSLKGMEGKEVKITLALGNSTFGGSGQTVENITDTTLLRRAHVCKLLQENVPWQSETLPSIAEALVVSKPAKQCSTWFLLQGNDSVGKTRLALAIAESVFGSADLLLHLDMRKLEDSATPFNEILAGSLKTNEKIVVLVEDVDFADPQFKFLADEFGTSKFGNLSGKYENSGQAIFILTSGGTRINEEKNKDSVMRLVLKVSETKATLESSSPCLGQKRRAELDLFGKIKNRRIEENDEEGVLISEQWNNRKKDFSRQSSFNTLDLNMKADDDDDDDGEYKGGESSPISSDLTGEAIADNNLNSIVFLDSIENRFEFNQSPAREKEKKELFSSKIKGSFEEVCGRQNLVNFTVDERVIEEIGVRCGSFTNSMFEKWLKDIFQSSLLQTVNFDDGKEGIVFTLCWGGKGDRKMDSGFMGSCLPKGIQVNYFMDI* 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1471 1057 Gene3D - 648 854 IPR027417 -
Dod03g1471 1057 ProSiteProfiles Clp repeat (R) domain profile. 8 175 IPR004176 -
Dod03g1471 1057 MobiDBLite consensus disorder prediction 890 916 - -
Dod03g1471 1057 Gene3D - 9 176 IPR036628 -
Dod03g1471 1057 SUPERFAMILY Double Clp-N motif 12 170 IPR036628 -
Dod03g1471 1057 Pfam Clp amino terminal domain, pathogenicity island component 26 46 IPR004176 -
Dod03g1471 1057 Pfam Clp amino terminal domain, pathogenicity island component 136 172 IPR004176 -
Dod03g1471 1057 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1031 - -
Dod03g1471 1057 PANTHER PROTEIN SMAX1-LIKE 5 1 1031 - -
Dod03g1471 1057 Gene3D - 228 423 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1471 Dod-Chr3 19453984 19458914 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1471 - - gmx:102660146 1416.75
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1471 03 19453984 19458914 Dod03g1471 03 19453984 19458914 ECH
Dod05g2300 05 49238574 49242762 Dod03g1471 03 19453984 19458914 PCT