Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1455 ATGGCAACGCGCTTCAGAAAGGCATATGGAGCTCTCAAGGACTCCACCAAGGTTGGCCTTGCCAAAGTCAATAGTGAATACAAGGAATTGGACATTGCTATTGTGAAGGCTACCAATCACGTAGAATATCCTCCAAAGGAACGTCATGTTCGAAAAATATTCTATGCGACCTCAGCACACCAGCCCCGAGCTGATGTGGCATATTGCATTCACAACCTTTCCAAGAGACTTTTCAAGACGCGAAATTGGATAGTTGCTATAAAGATATTGACAGTCATTCATAGGACTCTGAGGGAGGGTGATCCTACATTCAGAGAAGAGCTTCTAAACTACACACGCAGGGGAAACATTCTCCAAATATCCAATTTCAAAGATGACTCAAGCCCTAAAGCTTGGGATTGTTCTGCTTGGGTTCGAACCTATGCACTATTTTTAGAAGAAAGACTTGAATGCTTCAGAACCCTTAAATATGACATTGAGTCTGAGCGTTTAACAAAATCATTACCAGCTTCATCTAAAGCACATTCAAGAACTCGGTCGTTGGCTAATGATGATCTGTTGGAGCAGCTACCTGCACTGCAGCAGCTTCTGCACCGTCTTATTGGTTGTCAGCCTGAAGGATCTGCCTATAGCAATTATCTAGTACAGTATGCATTGGCCCTGGTATTGAAAGAGAGCTTCAAAATATATTGTGCACTGAACGATGGAATCATCAATCTTGTGGACTTGTTCTTTGATATGCCAAGACATGATGCAGTGAGGGCTCTGAATATTTATAAAAGAGCTGGCCAACAGGCTGAGCAACTTGCTGACTTTTATGAATACTGCAAAGGCTTGGAACTTGCTAAGCATTTCCAATTTCCAACACTCAGACAGCCACCTCCCTCTTTCCTTGCAACAATGGAAGAATACATTAGAGAAGCACCCCAGACTGGCTCAGTTCTCAAAAGACTGGAGTATCAGGAACAAGATCAATCATCTCCTAAAGAAGAACCAGAACCTGAACAACCTGAAGTGTCCCAAGAAGATGAAGAAGTCGAGGAAGAAGAACCAGTTGAAGAGGAAGAAACACAGCCTGAGGAAGAGGAGGCTGAGCTTCCTCCTCTGATATCAACCGACGCTAACGATGATTTACTGGGTCTGAGTGAAATAAATCCAAAAGCTCTAGAACTGGAGGAAAGCAATGCTTTGGCACTTGCAATTGTACAACCTGGAGGAAACAATCCAAACAATCTTGCTTTGAGTAACATTGGTGGGACTACTGGCTGGGAACTTGCACTGGTTACTACCCCTAGCAACCACACCAGCCAAGCGCCAGATCGTAAAATGGCTGGTGGATTTGACAAGCTATTACTAGACAGTTTGTATGAAGATGAAAATGCCAGGAGGCAACTTCAACTCCAAAATGCAGGTTATGGACATGGTGGGGAAATGGCTATACAAAATCCATTTGATCATTATAATCAGAATGATCCATTTGCAATGTCCAACAACATAGCACCCCCACCAAACGTGCAAATGGCATTAATGGGTCAGCAGCAACAACAGCAACAAATGATGTTCCAACAACAGCAGCAGAACCCGATGATGACCCCTCACCAGAACAACCCATATTCTCAATACCCTCAACAGATGCAACAGAATATGGGTTCTCACAATCCATTTGGAGATCCTTTACCGGTACCTAGCTACCCTCATGGTTCAATGCCTCCACAGGGGAATTACAATTTAATGTAG 1737 0.4352 MATRFRKAYGALKDSTKVGLAKVNSEYKELDIAIVKATNHVEYPPKERHVRKIFYATSAHQPRADVAYCIHNLSKRLFKTRNWIVAIKILTVIHRTLREGDPTFREELLNYTRRGNILQISNFKDDSSPKAWDCSAWVRTYALFLEERLECFRTLKYDIESERLTKSLPASSKAHSRTRSLANDDLLEQLPALQQLLHRLIGCQPEGSAYSNYLVQYALALVLKESFKIYCALNDGIINLVDLFFDMPRHDAVRALNIYKRAGQQAEQLADFYEYCKGLELAKHFQFPTLRQPPPSFLATMEEYIREAPQTGSVLKRLEYQEQDQSSPKEEPEPEQPEVSQEDEEVEEEEPVEEEETQPEEEEAELPPLISTDANDDLLGLSEINPKALELEESNALALAIVQPGGNNPNNLALSNIGGTTGWELALVTTPSNHTSQAPDRKMAGGFDKLLLDSLYEDENARRQLQLQNAGYGHGGEMAIQNPFDHYNQNDPFAMSNNIAPPPNVQMALMGQQQQQQQMMFQQQQQNPMMTPHQNNPYSQYPQQMQQNMGSHNPFGDPLPVPSYPHGSMPPQGNYNLM* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1455 578 PANTHER CLATHRIN ASSEMBLY PROTEIN 5 565 IPR045192 GO:0048268|GO:0072583
Dod03g1455 578 ProSiteProfiles ENTH domain profile. 22 159 IPR013809 -
Dod03g1455 578 Gene3D - 4 159 IPR008942 -
Dod03g1455 578 SUPERFAMILY GAT-like domain 176 307 - -
Dod03g1455 578 CDD ANTH_N 30 152 - -
Dod03g1455 578 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 5 565 - -
Dod03g1455 578 MobiDBLite consensus disorder prediction 320 376 - -
Dod03g1455 578 SMART enth_2 28 159 IPR013809 -
Dod03g1455 578 SUPERFAMILY ENTH/VHS domain 29 159 IPR008942 -
Dod03g1455 578 Pfam ANTH domain 29 307 IPR011417 GO:0005543
Dod03g1455 578 MobiDBLite consensus disorder prediction 336 367 - -
Dod03g1455 578 MobiDBLite consensus disorder prediction 547 578 - -
Dod03g1455 578 Gene3D ANTH domain 171 323 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1455 Dod-Chr3 19148221 19153252 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1455 K20044 - gmx:100783084 836.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2288 05 49077031 49082069 Dod03g1455 03 19148221 19153252 PCT