Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1287 ATGAATACCATATTGGCATTAAGCTTTAGTATAGCTATAGTTTATGTAGTTAGTTCTGAAAATGGCATGGCCTCTGCCAGAGTTTCAACAGCTTTAGATCCAGAACCTCTTGCTGATTCACCTGCCTCAGATTACATCCTTCCACCAGTCCCACATGACAGCCCTCCTTCCGATCACTCGGCTGAATCACCTGCCCCAGATGATAGCCTGTCTGATGAATATGAGCTAGATTCAATGCCATCAAGATATTATGATGTAACTCGTTATGGAGCAGTGGCTGATGGGAAGACAGACAGTAGCTCTGCATTCTTGGCAGCATGGGAGAATGCATGCTCTCATAAAGGACACTCAACCTTTTATGTCCCAAATGGGACATTCTACCTTGGTCCAGTCTCATTTTCAGGGCCCTGCCATAATAATAATGGGTCCCCAAAGATAGAGATGGTGGGAACTTTAAGGGCTCCAATGAGCCTCAATGACTTCCCCTCCCCTGAGTGGATTGAGTTCAGAAACCTGAATGGTCTCAATCTCACTGGACTCCATCACAAAGCAACCTTGGATGGTGAGGGTCAAGAATCCTGGTCAGAAGCTGAATGCCGCAGGGTCATGAAATGTCACAATTTCCCAACTGCTTTGAAATTCGTCAATGTTTCAGATGGGACAGTGAGAAATATATCTCTGCTGAACAGTAAGGCCTTTCATGTTGGTATCCTCTACTGTGATAACCTTGAATTCTCAAATGTCAACATTCATGCACCCGGGTATAGCCCAAACACTGATGGAATACACGTTGGTCTCTCCAATAACATCAGCATCACTTCCTCAACAATTGGAGTTGGTGATGACTGTGTCTCCATTGGACCTGGCAGCACTAACATATCAGTCTCATTTGTGCACTGTGGTCCAGGCCATGGAATCAGTGTGGGAAGCCTTGGCATGGAGTCAGATGAGAAGGAAGTGGATGGGGTTTATGTTTCAAACTGCACAATTAATGGTACAGAAAATGGTGTCAGAATAAAAACTTGGCCTGGTGCACCACCTAATCGTGCTTCTAATTTGGTGTTTGAGGACATTAAAATGATCAATGTCTCAAACCCCATCATCATAGACCAAGTGTACTGTCCTTCAAACACTTGTAAAAGTAAAAAGCCATCACAAGTGAGGATTAGTGATGTGAGCTTCAAGAATATTAGTGGCACTTATGACACCAAGTCTGCAGTGACTCTGAAGTGCAGCACTGCTGTCCCTTGTGAGAATGTGCATATCGTTGACATTCATCTCAATCACACAGATCCAGAAAGTAAGAAGCGTGGCCGTTTCATTGCAAAGGGTGGAGTTCATGATTTAAAAGTTCTTAATTCTCATTTCTGA 1371 0.4384 MNTILALSFSIAIVYVVSSENGMASARVSTALDPEPLADSPASDYILPPVPHDSPPSDHSAESPAPDDSLSDEYELDSMPSRYYDVTRYGAVADGKTDSSSAFLAAWENACSHKGHSTFYVPNGTFYLGPVSFSGPCHNNNGSPKIEMVGTLRAPMSLNDFPSPEWIEFRNLNGLNLTGLHHKATLDGEGQESWSEAECRRVMKCHNFPTALKFVNVSDGTVRNISLLNSKAFHVGILYCDNLEFSNVNIHAPGYSPNTDGIHVGLSNNISITSSTIGVGDDCVSIGPGSTNISVSFVHCGPGHGISVGSLGMESDEKEVDGVYVSNCTINGTENGVRIKTWPGAPPNRASNLVFEDIKMINVSNPIIIDQVYCPSNTCKSKKPSQVRISDVSFKNISGTYDTKSAVTLKCSTAVPCENVHIVDIHLNHTDPESKKRGRFIAKGGVHDLKVLNSHF* 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1287 456 Gene3D - 76 444 IPR012334 -
Dod03g1287 456 SMART pbh1 267 288 IPR006626 -
Dod03g1287 456 SMART pbh1 320 341 IPR006626 -
Dod03g1287 456 SMART pbh1 350 371 IPR006626 -
Dod03g1287 456 SMART pbh1 240 266 IPR006626 -
Dod03g1287 456 PANTHER - 66 432 - -
Dod03g1287 456 MobiDBLite consensus disorder prediction 37 74 - -
Dod03g1287 456 Pfam Glycosyl hydrolases family 28 111 433 IPR000743 GO:0004650|GO:0005975
Dod03g1287 456 PANTHER EXOPOLYGALACTURONASE-LIKE 66 432 - -
Dod03g1287 456 SUPERFAMILY Pectin lyase-like 80 447 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1287 Dod-Chr3 16394277 16397218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod03g1287 82 429 Glycoside Hydrolase AT1G17150 45.272 1.16e-100 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1287 K01213 - cit:102614588 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod05g2656 05 52759918 52762628 Dod03g1287 03 16394277 16397218 PCT