Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod03g1273 ATGGGTGTTTTCACTTGTGAAAGCGAGCTCGTTTCACCTATAGCTCCTGCAAAGCTATACAAAGCCATGGTCTCGGACTTTAGCAATGTGTGGCCAAAAGCTTTACCTGACTTCATTAAGAAGGCTGAAACCATTGAAGGAGATGGAGGGCCTGGATCCATCAAGAAGCTCACTCTTGCTGAAGGATACGTGAAGCACAGGGTAGAAGCGCTCGACACAGAAAACTTTGTGTACCACTACAGCGTAATTGAAGGCTCCGTATTGCCAGACACAGTGGAGAAGATCTCTAATGAGTACAAATTGGTGGCAAGCGCTGATGGAGGATGCATCATAAAGTACACAAGCAAATACTACACCAAAGGCGATGAGAAGCTCACAGAAGAGTTTCTCAATGCTGGCAAGGAAAAATCTGCTGGCTTCACCAAGGCTGTTGAGAGTTATCTCTTGGCTAATTAA 456 0.4539 MGVFTCESELVSPIAPAKLYKAMVSDFSNVWPKALPDFIKKAETIEGDGGPGSIKKLTLAEGYVKHRVEALDTENFVYHYSVIEGSVLPDTVEKISNEYKLVASADGGCIIKYTSKYYTKGDEKLTEEFLNAGKEKSAGFTKAVESYLLAN* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod03g1273 151 Gene3D - 2 151 IPR023393 -
Dod03g1273 151 CDD Bet_v1-like 4 148 - -
Dod03g1273 151 PRINTS Major pollen allergen Bet V1 signature 81 94 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Dod03g1273 151 PRINTS Major pollen allergen Bet V1 signature 106 122 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Dod03g1273 151 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Dod03g1273 151 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Dod03g1273 151 PRINTS Major pollen allergen Bet V1 signature 62 81 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Dod03g1273 151 PRINTS Major pollen allergen Bet V1 signature 140 150 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Dod03g1273 151 ProSitePatterns Pathogenesis-related proteins Bet v I family signature. 85 117 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Dod03g1273 151 PANTHER - 1 151 - -
Dod03g1273 151 SUPERFAMILY Bet v1-like 3 151 - -
Dod03g1273 151 Pfam Pathogenesis-related protein Bet v 1 family 1 151 IPR000916 GO:0006952
Dod03g1273 151 PANTHER NODULIN-13 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod03g1273 Dod-Chr3 16156880 16158515 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod03g1273 - - gmx:100306363 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod03g1273 03 16156880 16158515 Dod03g1273 03 16156880 16158515 ECH
Dod03g1273 03 16156880 16158515 Dod05g2640 05 52641704 52642280 PCT