Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g3183 ATGTCTCGAATCTTCTTTAGATGTAAGAAGGTGAAGGAAGTGGCGTCACTATCGGAGACCCACTTGGCAGTTAACCCAACCCAATCCGGTCTGAATTTCCGGTTCAATCGGGTGTGCCCAATCTCGACCCACCTGAACCACCACATCCACATCGGCGCCGGCGCCGGAGCCGGACATCATCTCCGGCGGGAGGCCCTTGTCGGAGTTCAGGAGCGGTACAAGTGGGACCGGGGCGGATCAGACGACAACCCGACCCGGAAGATCCGGGCAGAGGCTAACTGCCCGCGTTGCACCAAGGACATGAACCTCGCATTCTCCAACCGCCATATTCCCACAACAACAACAACAACAACCCTTTCTTCATCTGATTCTGATTCTGGTAATGGTAATGGTTCTGGTTCCAATTTGGCACCACATGTTCCTGTTCATGATGGCGGAGGAGGAGAAGGTGGTTACCAAGCGGTGAATCTGTGCCCAACTTGCAAAACTGCTTATTACTTTCGCCCTTACAACACTTCACCTTTGCAAGGTACCTTTGTGGAGATTGGTAGGGTCACTAATAATAACAACAATGGTGTTGTTGGCAATGGTAAATCTCAGTCTTCTAGGAGGATCACACATGGGAAAGGTGGTAAGAGTGGTCAAAGTGCTGGTGAGGATCATGGTTTGAAGAGTGGTGGTGGGGGCAGTTGGCTTGAGGTGTCATTGTGGGACACTTTAAGGTCCTACAATGGTGGTGGTGGTGGGAATAATGGGGAGCCACCTGAGACATCATGGCCTCCACCACCGGGCGGTGGTAATGGGAATGGTTTGGCTGTGCATACTCCTCCAGGGCCACCTTTTGCACCCGGGATTAATGCTATCCGGGCTTCGGGGCCAAGGGAAGGTGGAGGAGGTGGGGGCAATGGAGAGAAAACTACTTGGGGAGGGTCTAATTTGGGTAAGGATTTGCCCTCCCCAAAGGAGATCTGCAAGGGACTTGACAAGTTTGTTATTGGCCAAGAGAGAGCAAAGAAGGTGCTTTCTGTAGCTGTTTATAACCACTATAAAAGAATATATCATGCCACTTTGCAGAAAGGGTCAGGGGCAGATTCTGGAGTTTCAGAAGGATTAGATGATGACGATAATGTGGAGCTAGAAAAGAGTAATGTTCTTTTGATGGGTCCAACAGGGTCAGGGAAGACATTACTTGCGAAAACACTAGCTCGATTTGTGAATGTTCCTTTTGTCATTGCTGATGCAACAACCTTAACACAGGCAAGTATGCGCTCATTAATTAGGAAAAATTCTAATTTGCAGGCCGGTTATGTTGGAGAAGATGTCGAATCAATACTGTATAAGCTACTAGCAGCAGCAGATTTCAATGTTGCAGCAGCTCAACAAGGGATAATTTACATTGATGAAGTTGACAAGATAACTAAGAAGGCTGAGAGCTTAAATATCAGCCGGGATGTTTCTGGTGAGGGCGTTCAACAGGCATTATTAAAAATGCTGGAAGGAACTATAGTCAATGTTCCTGAGAAAGGAGCTAGGAAGCACCCACGGGCTGATAACATACAGATGGACACAAAGAATATTCTTTTTATTTGTGGTGGAGCGTTTATTGATCTTGAAAAAACAATTTCAGAGAGACGGCAAGATTCTTCTATTGGTTTTGGAGCCCCAGTTCGTGCCAATATGAGAGCTGGCAGAATAATAGATTCTGTAGTAACATCTTCTTTACTTGAATCGGTGGAAAGTGCAGATCTTATTGCATATGGCCTCATACCAGAGTTTATTGGACGATTCCCCATCTTAGTGAGCTTGTCCGCTTTAACTGAAGACCAACTTATGCTGGTCCTCACAGAACCAAAAAATGCTCTTGGCAAGCAGTACAAAAAATTATTTAGTATGAATGATGTTAAGCTACACTACACAGAAAAAGCTCTGAGACTAATTGCAAAGAAGGCGATGGCCAAAAATACTGGCGCCAGGGGATTAAGATCCCTACTGGAAAGCATTTTAACTGAAGCAATGTTTGAGGTTCCAGATATAAAGACAGGAGATGACCGGGTTGATGCAGTTGTTGTTGATGTAGAGTCAGTAGGAACACTAAATGCCCCTGGATGTGGAGGAAAAATTCTTCGCGGAGACAGTGCTTTGGAGCGGTACCTAGCTAAGATGAAGGATTCAGTGGTATGA 2181 0.4626 MSRIFFRCKKVKEVASLSETHLAVNPTQSGLNFRFNRVCPISTHLNHHIHIGAGAGAGHHLRREALVGVQERYKWDRGGSDDNPTRKIRAEANCPRCTKDMNLAFSNRHIPTTTTTTTLSSSDSDSGNGNGSGSNLAPHVPVHDGGGGEGGYQAVNLCPTCKTAYYFRPYNTSPLQGTFVEIGRVTNNNNNGVVGNGKSQSSRRITHGKGGKSGQSAGEDHGLKSGGGGSWLEVSLWDTLRSYNGGGGGNNGEPPETSWPPPPGGGNGNGLAVHTPPGPPFAPGINAIRASGPREGGGGGGNGEKTTWGGSNLGKDLPSPKEICKGLDKFVIGQERAKKVLSVAVYNHYKRIYHATLQKGSGADSGVSEGLDDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQASMRSLIRKNSNLQAGYVGEDVESILYKLLAAADFNVAAAQQGIIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRADNIQMDTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRAGRIIDSVVTSSLLESVESADLIAYGLIPEFIGRFPILVSLSALTEDQLMLVLTEPKNALGKQYKKLFSMNDVKLHYTEKALRLIAKKAMAKNTGARGLRSLLESILTEAMFEVPDIKTGDDRVDAVVVDVESVGTLNAPGCGGKILRGDSALERYLAKMKDSVV* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g3183 726 Pfam C-terminal, D2-small domain, of ClpB protein 605 675 IPR019489 -
Dod02g3183 726 SMART ClpB_D2_small_2 605 698 IPR019489 -
Dod02g3183 726 CDD AAA 381 506 - -
Dod02g3183 726 MobiDBLite consensus disorder prediction 190 209 - -
Dod02g3183 726 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED 43 722 - -
Dod02g3183 726 SMART AAA_5 380 556 IPR003593 -
Dod02g3183 726 TIGRFAM clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 314 695 IPR004487 GO:0005524|GO:0006457|GO:0051082|GO:0140662
Dod02g3183 726 Gene3D - 311 603 IPR027417 -
Dod02g3183 726 MobiDBLite consensus disorder prediction 190 230 - -
Dod02g3183 726 Pfam AAA domain (Cdc48 subfamily) 380 598 IPR003959 GO:0005524|GO:0016887
Dod02g3183 726 MobiDBLite consensus disorder prediction 243 318 - -
Dod02g3183 726 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 316 686 IPR027417 -
Dod02g3183 726 MobiDBLite consensus disorder prediction 106 147 - -
Dod02g3183 726 Gene3D - 604 704 - -
Dod02g3183 726 PANTHER ATPASE, AAA-TYPE, CORE-RELATED 43 722 - -
Dod02g3183 726 MobiDBLite consensus disorder prediction 106 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g3183 Dod-Chr2 66788491 66795143 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g3183 K03544 - gmx:100805340 1004.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g3183 02 66788491 66795143 Dod06g1492 06 19998605 20005569 PCT