Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2846 ATGGGGCACTCGGAGAATTACACAATCTTGCTAGTCATTTTGAGTTTCCTGGTTATATGCAAGTGCCAGGGCAAAGTTCATTATTATGACTTCGTGCTGAAGGAGAAGAATTTCACAAAGCTATGCAGCGCAAAGAGCATATTGACAGTAAACGACAGCTTTCCAGGGCCAAGCATTCTTGTTCAGAAAGGAGATACAGCTTTTGTTACTGTCCACAACCAAGGAACATATGGGGTCACTATTCACTGGCATGGGGTGAGGGAACCAAGGGACCCTTGGTCAGATGGACCTGAGAACATAACACAGTGTCCTATTCCACCAGGAACGAGCTTCACTCAGAAGGTGGCATTTACAGTGGAAGAAGGAACTCTTTGGTGGCATGCTCATAGTAGTTGGACACGTGCCACTGTCCATGGTGCTATTCTCATCCTACCTGCCAATGGAACTTCATATCCATTCCCTGAACCACATGGACAAGAAACTCTTATCATTGGGGAATGGTATAAGGGTGATGTGATGCAAAATATAAATTCAGCTCTAGCAAATGGTGGCGACCCCAACACGTCAGATGCTTACACCATCAATGGCCAACCTGGTGACTTCTATAATTGCTCAAGAGAAACAACATATCGCTTTTTGGTTGAATATGGAAAGACCTATCTGTTGCGCATAATTAATGCTGCCATGAATGAAGAACATTTCTTTGGGATTGCTCATCACAACCTCACACTAGTAGGCATTGATGCTTCCTACACAAAGCCCCTAAATACCAGTTTCATCATGATCACGCCAGGACAAACGATGGACGTGCTGGTCACAGCAAACCAACCAAAAGATCACTATTACATTGCTGCTAAGCCTTTCTATGATGGCCTTGCTCCCTATGATAATTCCACCACAACAGCTATTCTGCAGTACTGTGGGAATTACACTTCATCATCACAAACTCCTTTCCCCATTCTTCCTTCGGTGAATGACTCAGCAAAAGTATTTAATTTTACTAAGAGCTTGAGGAGTTTGGCAAGCCAATATCACCCAGCCAATGTACCAATAAATGTGACCAGAAAAATTTATATGACAGTATCCCTAAATGTGTTGCCCTGTCAAAATCCAAATAGGACTTGCTTAGGCCCTAATGGAACCCGGAAGGCTTCAGGCTTGAACAACATAAGTTTTCAGACCCCACAGATTGATATACTTGAAGCATACTACTGGAACATTTCTGGAGTTTTCACTGAGGACTTTCCGGACACACCACCTTTCTTTTACAATTTCACTGGAGATGTTGGAAGCAACACACTATTCGCAAGCACAGGAACCAGGGTGCTGATGTTTGACTATAATGAGAATGTTGAAATCGTGTGGCAAGGAACCAATGTTTTTAGTGCAGAGAATCACCCCATGCACATTCATGGTACTAGCTTCTTTGTTGTGGGTGTAGGCCTAGGAAATTTCAACAATGTGACAGATCCAAAATCCTACAATTTAGTTGATCCACCACAAGTCAATACCATTGGCCTTCCCAAGAATGGATGGCTTGCCTTAAGATTTGTTGCCAACAATCCTGGGGTATGGTATATCCATTGCCATCTTGATGCGCACACTAGCTGGGGCATGGATACTGTGCTCATTGTGAGAAATGGGGGTACCACACAGACTAGTATTGTTCCACCTCCGAAATACATGCCACCGTGTTCTTAA 1701 0.435 MGHSENYTILLVILSFLVICKCQGKVHYYDFVLKEKNFTKLCSAKSILTVNDSFPGPSILVQKGDTAFVTVHNQGTYGVTIHWHGVREPRDPWSDGPENITQCPIPPGTSFTQKVAFTVEEGTLWWHAHSSWTRATVHGAILILPANGTSYPFPEPHGQETLIIGEWYKGDVMQNINSALANGGDPNTSDAYTINGQPGDFYNCSRETTYRFLVEYGKTYLLRIINAAMNEEHFFGIAHHNLTLVGIDASYTKPLNTSFIMITPGQTMDVLVTANQPKDHYYIAAKPFYDGLAPYDNSTTTAILQYCGNYTSSSQTPFPILPSVNDSAKVFNFTKSLRSLASQYHPANVPINVTRKIYMTVSLNVLPCQNPNRTCLGPNGTRKASGLNNISFQTPQIDILEAYYWNISGVFTEDFPDTPPFFYNFTGDVGSNTLFASTGTRVLMFDYNENVEIVWQGTNVFSAENHPMHIHGTSFFVVGVGLGNFNNVTDPKSYNLVDPPQVNTIGLPKNGWLALRFVANNPGVWYIHCHLDAHTSWGMDTVLIVRNGGTTQTSIVPPPKYMPPCS* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2846 566 Pfam Multicopper oxidase 432 547 IPR011706 GO:0005507|GO:0016491
Dod02g2846 566 ProSitePatterns Multicopper oxidases signature 1. 523 543 IPR033138 -
Dod02g2846 566 TIGRFAM laccase: laccase 25 565 IPR017761 GO:0046274|GO:0048046|GO:0052716
Dod02g2846 566 CDD CuRO_2_LCC_plant 160 306 IPR034285 -
Dod02g2846 566 PANTHER LACCASE 14 565 - -
Dod02g2846 566 ProSitePatterns Multicopper oxidases signature 2. 528 539 IPR002355 GO:0005507
Dod02g2846 566 Gene3D - 158 343 IPR008972 -
Dod02g2846 566 Gene3D - 17 145 IPR008972 -
Dod02g2846 566 Pfam Multicopper oxidase 161 308 IPR001117 -
Dod02g2846 566 Gene3D - 374 566 IPR008972 -
Dod02g2846 566 SUPERFAMILY Cupredoxins 23 169 IPR008972 -
Dod02g2846 566 SUPERFAMILY Cupredoxins 153 341 IPR008972 -
Dod02g2846 566 CDD CuRO_1_LCC_plant 29 145 IPR034288 GO:0005507
Dod02g2846 566 PANTHER MULTI-COPPER OXIDASE 14 565 IPR045087 -
Dod02g2846 566 Pfam Multicopper oxidase 34 146 IPR011707 GO:0005507
Dod02g2846 566 SUPERFAMILY Cupredoxins 350 563 IPR008972 -
Dod02g2846 566 CDD CuRO_3_LCC_plant 410 548 IPR034289 GO:0005507
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2846 Dod-Chr2 60699667 60703256 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2846 K05909 - gmx:100814128 977.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g2846 02 60699667 60703256 Dod06g0948 06 11987406 11990585 PCT