Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2499 ATGACCAAGATCTTTGTGCTGCTATGTGTGCTCTTCTTTGCTTCTCCTGGATTTGTCAGTGGCTCTGTTAAGGAAGACCATATTAGGATATTTGAGCTCAAGAAGGGTGATCTACATCTGAGGGTCACCAACTGGGGTGCCACACTTGTGTCCTTAATCCTTCCTGATAAGTATGGAAAATTGGGAGACATTGTTCTTGGATATGATTCTCTCAAGGCTTACACTAATGATTCAACATACTTTGGAGCTACTGTTGGCCGGGTAGCTAACAGAATTGGTGGAGCTCAGTTTACTTTAAATGGAACCCATTACAAATTAATTGCTAATGAAGGAAACGACACACTTCACGGTGGACCTAGAGGATTTAGTGATGTGCTCTGGAAAGTGGAAAGGTATCAAAGAGAAGGTTTAAGACCCATTATCACCTTCAGTTACCACAGTTTTGATGGGGAAGAAGGATTTCCTGGTGATCTCCTTGTAACTGTGAGCTACATTCTTACTGGGAAGAACCGTTTGAGCATAATCATGAAAGCAAAAGCTCTAAACAAGCCTACTCCAGTGAATCTGGTCAACCATGCCTACTGGAACCTAGGAAACCACAACAGTGGCAATATTCTAGATGAAGTGGTTCAGATATTTGGATCCCAAATCACACCCCTTGATAGCCAACTCATTCCCACAGGCCAATTTGCTTCTGTGAAGGGAACCCCATATGATTTCCTCAAGCCAGAAGTTGTTGGAGCTAGGATCAACCAGTTACCTAAAACCAATGGCTATAACATCAATTATGTCCTTGATGGTGACAAAGAGATCAAGGTGGCAGCTATAGTGATGGACAAGGGGTCAGGGAGGGTGATGAAGCTGGCTACAAATCAGCCTGGTTTGCAGCTTTACACAGCTAATTTTGTCAAGAATGAGAAGGGGAAAGGTGGATTTGTGTATCAGCCTCGTTCAGCACTCTGTTTGGAGACTCAAGCATTCCCTGATGCAGTGAATCATCCTAATTTTCCATCAACTATTGTGACCCCAGAAAAGCCTTACAAGCATTATATGTTCTTGAAGTTCTCCACCAAACCTCCTAATGCTTTTTCAAAGTCCTAA 1101 0.4278 MTKIFVLLCVLFFASPGFVSGSVKEDHIRIFELKKGDLHLRVTNWGATLVSLILPDKYGKLGDIVLGYDSLKAYTNDSTYFGATVGRVANRIGGAQFTLNGTHYKLIANEGNDTLHGGPRGFSDVLWKVERYQREGLRPIITFSYHSFDGEEGFPGDLLVTVSYILTGKNRLSIIMKAKALNKPTPVNLVNHAYWNLGNHNSGNILDEVVQIFGSQITPLDSQLIPTGQFASVKGTPYDFLKPEVVGARINQLPKTNGYNINYVLDGDKEIKVAAIVMDKGSGRVMKLATNQPGLQLYTANFVKNEKGKGGFVYQPRSALCLETQAFPDAVNHPNFPSTIVTPEKPYKHYMFLKFSTKPPNAFSKS* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2499 366 Pfam Aldose 1-epimerase 31 351 IPR008183 GO:0005975|GO:0016853
Dod02g2499 366 Gene3D - 20 358 IPR014718 GO:0030246
Dod02g2499 366 SUPERFAMILY Galactose mutarotase-like 23 356 IPR011013 GO:0003824|GO:0005975|GO:0030246
Dod02g2499 366 PANTHER ALDOSE-1-EPIMERASE 1 364 - -
Dod02g2499 366 PIRSF GALM 18 358 IPR015443 GO:0016853|GO:0019318
Dod02g2499 366 CDD galactose_mutarotase_like 31 355 - -
Dod02g2499 366 PANTHER ALDOSE 1-EPIMERASE 1 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2499 Dod-Chr2 55191800 55195447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2499 4 356 Miscellaneous Gene Families AT3G47800 52.394 4.59e-134 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2499 K01785 - gmx:100779602 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g2499 02 55191800 55195447 Dod02g2499 02 55191800 55195447 ECH
Dod02g2499 02 55191800 55195447 Dod01g0110 01 2166118 2169054 PCT