Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g0110 ATGATGACCAAGATCTTTGTGCTGCAGCTATGTCTGATCTTCTTAGCTGCTTCAGGTCTTGTCAATGGCTCTGCCAAGAATGAAAAGATTGGGATATTTGAGCTCAAGAAAGGTGACCTTTCTTTGAAGGTCACCAACTGGGGTGCATCAATTTTGTCCCTTGTCCTCCCTGATAAGAAAGGAAAGTTGGGTGATGTTGTTCTTGGATATAATTCAATTAAGGATTACACTAATGGTACAACTTACTTTGGAGCTACTGTTGGCCGGGTTGCTAACAGAATTGGCGGAGCTCAGTTTACTCTAAACGGAATCCATTACAAATTGGTTGCTAATGAAGGAAACAATACACTTCATGGTGGATCGAGAGGATTTAGTGATGTTCTTTGGAAAGTGGAAAGGTATCAGAAAGCAGGCCCCAATCCCAGTATTACCTTCAGCTACCACAGTTTTGATGGTGAAGAAGGATTCCCTGGTGATCTCCTAGTAACTGTGAGCTACATTCTAACTGGGAAAAATCATTTGTCCATAGTCATGAAAGCAAAAGCACTAAACAAGCCTACTCCAGTGAATCTGGCTAACCATGCTTATTGGAACCTAGGAGGCCAAAACAGAAAATTTGCTTCTGTGAAAGGAACTGCCTATGATTTCCTCAAGCCACACACTGTTGGAAGCAGGATCAACCAGCTAGCTGCAACTAAAGGCTATGACATAAACTATGTGCTTGATGGTGAGAAAGGCAAGAAGATCAAGCTAGCAGCAGTGGTGCAAGATAAGAAGTCTGGGAGAGCGTTGAAGCTCTACACAAATGCTCCTGGTTTGCAGTTTTATACTGGTAACTACATTAAGGATGTTAAGGGTAAAGGTGGATATGTGTACCAATCTCATGCAGGATTATGTTTGGAGAGTCAAGCCTTTCCTGATTCAGTGAATCACCCTAATTTCCCTTCAACAATTGTGACCCCAGAAAAGCCTTACAAGCATTATATGCATTTTAAGTTTTCCGCCAAAGTTCCTTATTGA 1020 0.4176 MMTKIFVLQLCLIFLAASGLVNGSAKNEKIGIFELKKGDLSLKVTNWGASILSLVLPDKKGKLGDVVLGYNSIKDYTNGTTYFGATVGRVANRIGGAQFTLNGIHYKLVANEGNNTLHGGSRGFSDVLWKVERYQKAGPNPSITFSYHSFDGEEGFPGDLLVTVSYILTGKNHLSIVMKAKALNKPTPVNLANHAYWNLGGQNRKFASVKGTAYDFLKPHTVGSRINQLAATKGYDINYVLDGEKGKKIKLAAVVQDKKSGRALKLYTNAPGLQFYTGNYIKDVKGKGGYVYQSHAGLCLESQAFPDSVNHPNFPSTIVTPEKPYKHYMHFKFSAKVPY* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g0110 339 SUPERFAMILY Galactose mutarotase-like 25 334 IPR011013 GO:0003824|GO:0005975|GO:0030246
Dod01g0110 339 Pfam Aldose 1-epimerase 33 332 IPR008183 GO:0005975|GO:0016853
Dod01g0110 339 PANTHER ALDOSE 1-EPIMERASE 2 203 - -
Dod01g0110 339 PANTHER ALDOSE 1-EPIMERASE 205 338 - -
Dod01g0110 339 PANTHER ALDOSE-1-EPIMERASE 2 203 - -
Dod01g0110 339 PIRSF GALM 203 336 IPR015443 GO:0016853|GO:0019318
Dod01g0110 339 PIRSF GALM 17 206 IPR015443 GO:0016853|GO:0019318
Dod01g0110 339 Gene3D - 204 336 IPR014718 GO:0030246
Dod01g0110 339 Gene3D - 22 203 IPR014718 GO:0030246
Dod01g0110 339 PANTHER ALDOSE-1-EPIMERASE 205 338 - -
Dod01g0110 339 CDD galactose_mutarotase_like 33 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g0110 Dod-Chr1 2166118 2169054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g0110 28 335 Miscellaneous Gene Families AT3G47800 53.293 2.09e-122 354
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g0110 K01785 - gmx:100798975 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g2499 02 55191800 55195447 Dod01g0110 01 2166118 2169054 PCT