Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2435 ATGTGGAACTTTGCATCAAACTGCATTGCTGGAAGTGTGGGACTGAAAAATGAATCCACTAAGCCAACTCATTCTGCTTCAGAATGTTCTGATGATGAGACTTCTGTTGTTGGCAGAGAGGAAGGGCTGGAATGCCCCATATGCTGGGAATCCTTCAACATTGTTGAAAATGTGCCCTATGTATTATGGTGTGGTCACACCCTCTGTAAAAATTGTATCCTGGGTCTGCAATGGGCTGTTGTGAAATTTCCAACGCTGCCAATTCAACTTCCACTTTTTATCTCCTGCCCATGGTGCAACATTCTATCTTTCCGCTTGGTTTATCGTGGAAATCTTAAATTCCCTCGCAAGAACTACTTTCTTCTCTGGATGGTTGAGAGCATGAATGGTGATAGAGTGAAATCACATTCAGCTTTCTGTAGGGATAATCAACAACATTGGCCAATCAAAGAAACTTCAACCACGGGAAGCCATGGAAACCTCCAGAGAGGCCAAGTTCGCCATCCAGAGACCTCAGATTCTGGCCAGTATCATGGCAATACTGGTAATTATCTCACTATGGAAAGACTGCATGCGTCTCTTCGGAAGTCACTGATTTTTGTTGTCCAATTGACAGCTAAGTTCCCATTGGTCATTATATTTCTTTTGATTGTCCTATATGCAATACCAGCCAGTGCTGCTATTTTGGCTCTGTATATACTGGTTACAATTCTGTTTGCTCTCCCATCATTTCTCATCTTGTACTTCTCATATCCTAGTTTGGATTGGCTTTTCAGAGAAATCATTGCTTGA 792 0.4217 MWNFASNCIAGSVGLKNESTKPTHSASECSDDETSVVGREEGLECPICWESFNIVENVPYVLWCGHTLCKNCILGLQWAVVKFPTLPIQLPLFISCPWCNILSFRLVYRGNLKFPRKNYFLLWMVESMNGDRVKSHSAFCRDNQQHWPIKETSTTGSHGNLQRGQVRHPETSDSGQYHGNTGNYLTMERLHASLRKSLIFVVQLTAKFPLVIIFLLIVLYAIPASAAILALYILVTILFALPSFLILYFSYPSLDWLFREIIA* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2435 263 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 34 138 IPR013083 -
Dod02g2435 263 PANTHER UBIQUITIN-PROTEIN LIGASE 1 262 - -
Dod02g2435 263 MobiDBLite consensus disorder prediction 149 178 - -
Dod02g2435 263 SUPERFAMILY RING/U-box 40 103 - -
Dod02g2435 263 ProSitePatterns Zinc finger RING-type signature. 64 73 IPR017907 -
Dod02g2435 263 ProSiteProfiles Zinc finger RING-type profile. 45 100 IPR001841 -
Dod02g2435 263 PANTHER OS03G0211100 PROTEIN 1 262 - -
Dod02g2435 263 Pfam RING-type zinc-finger 45 78 IPR027370 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2435 Dod-Chr2 53631354 53632145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2435 1 263 Miscellaneous Gene Families AT3G29270 64.151 4.37e-120 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2435 - - gmx:100809368 466.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g2435 02 53631354 53632145 Dod02g2435 02 53631354 53632145 ECH
Dod02g2435 02 53631354 53632145 Dod01g0183 01 3100310 3103571 PCT