Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2158 ATGGCTGCATCATCCACGACCTTTTGCAACTTCCTCACTTTCTTCCTACCCACAAAATCACCGCCACCGCCACCGCCACCGCCACCCAATCTCAACCTCCCTCCTTCACCCACTCCCTTCCCTTCCCATACCAACAATAAATCCTCACGCCACGTGGCCCCACTCCCACTGGTTCCCCAAGACCACGATCACTCCTCCTCATCTTCTTCCTGCTACTCTGCCAGTGCGTGTTCCTCTTCTGATTCTCTATTAGGAGGAGACCTGTCCTCTGTGGTGTGCCCTTCTCTGGCCTACGCGAACACGCTGTTCTTCAAGTCAGCGTACAACGTGCAGGTGGTGGTGGATGACAACGAGCCAGAGGAGAGGCTGCTCAACAGGTTCCGCAGAGAGGTGATGAAGGCTGGCGTCATTCAGGAGTGCAAGAGGAGGAGGTACCATGAGGACAGCCAGGATAAGAGGAAGCGCAAGTCACGTGAGGCTGCCAAGCGTACCCGCAGAAGGCGAACCCAGTCAAAATCCGCAGCACATAACAGAAAGGATGTCCCATCAACCAAGAAGGACGAGGATGAGGATGATGATAATTGGGATCTACCTGAAGGAGACACTGTATATTGA 615 0.5415 MAASSTTFCNFLTFFLPTKSPPPPPPPPPNLNLPPSPTPFPSHTNNKSSRHVAPLPLVPQDHDHSSSSSSCYSASACSSSDSLLGGDLSSVVCPSLAYANTLFFKSAYNVQVVVDDNEPEERLLNRFRREVMKAGVIQECKRRRYHEDSQDKRKRKSREAAKRTRRRRTQSKSAAHNRKDVPSTKKDEDEDDDNWDLPEGDTVY* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2158 204 MobiDBLite consensus disorder prediction 156 173 - -
Dod02g2158 204 MobiDBLite consensus disorder prediction 144 204 - -
Dod02g2158 204 MobiDBLite consensus disorder prediction 19 64 - -
Dod02g2158 204 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21 31 204 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dod02g2158 204 Gene3D Ribosomal protein S8 124 162 IPR038380 -
Dod02g2158 204 PRINTS Ribosomal protein S21 family signature 113 121 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dod02g2158 204 PRINTS Ribosomal protein S21 family signature 121 130 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dod02g2158 204 PRINTS Ribosomal protein S21 family signature 133 143 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dod02g2158 204 PRINTS Ribosomal protein S21 family signature 145 155 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dod02g2158 204 MobiDBLite consensus disorder prediction 174 188 - -
Dod02g2158 204 Pfam Ribosomal protein S21 111 165 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dod02g2158 204 MobiDBLite consensus disorder prediction 19 41 - -
Dod02g2158 204 PANTHER PROTEIN S21 FAMILY PROTEIN, PUTATIVE-RELATED 31 204 - -
Dod02g2158 204 Hamap 30S ribosomal protein S21 [rpsU]. 109 165 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dod02g2158 204 TIGRFAM S21p: ribosomal protein bS21 110 167 IPR001911 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2158 Dod-Chr2 44773310 44775493 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2158 - - mnt:21400598 165.236
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1758 01 51294528 51296162 Dod02g2158 02 44773310 44775493 PCT