Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1758 ATGTGCCCCTCTCTGGCGCACGCCAACACCCTCTTCTTCCGGTCTGCGTACAATGTGCAGGTCGTCGTCGACGACAACGAGCCGGAGGAGAGGCTCCTCAACAGGTTCCGCCGGGAAGTCATGAGGGCTGGCGTCATCCAAGAGTGCAAGCGCAGAAGGTTCTTCGAGAACAAGCAGGACGAGAAGAAGCGCAAGACCCGCGAGGCCGCCAAGCGTAACCGTAGATCCAGGCGCCCGCAGATGAGATCTCCAATGCAGAACAAGATAGATGCCCCGACAATCAAGAAGGAAGACGATGATGATAACTGGGATCTACCTGAGGGAGACACTCCTTATTGA 339 0.5664 MCPSLAHANTLFFRSAYNVQVVVDDNEPEERLLNRFRREVMRAGVIQECKRRRFFENKQDEKKRKTREAAKRNRRSRRPQMRSPMQNKIDAPTIKKEDDDDNWDLPEGDTPY* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1758 112 MobiDBLite consensus disorder prediction 57 112 - -
Dod01g1758 112 TIGRFAM S21p: ribosomal protein bS21 19 75 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dod01g1758 112 PRINTS Ribosomal protein S21 family signature 54 64 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dod01g1758 112 PRINTS Ribosomal protein S21 family signature 30 39 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dod01g1758 112 PRINTS Ribosomal protein S21 family signature 22 30 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dod01g1758 112 PRINTS Ribosomal protein S21 family signature 42 52 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dod01g1758 112 Pfam Ribosomal protein S21 20 74 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dod01g1758 112 Hamap 30S ribosomal protein S21 [rpsU]. 18 74 IPR001911 GO:0003735|GO:0005840|GO:0006412
Dod01g1758 112 PANTHER PROTEIN S21 FAMILY PROTEIN, PUTATIVE-RELATED 1 112 - -
Dod01g1758 112 Gene3D Ribosomal protein S8 33 71 IPR038380 -
Dod01g1758 112 PANTHER MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21 1 112 IPR001911 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1758 Dod-Chr1 51294528 51296162 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1758 - - gmx:100780245 168.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1758 01 51294528 51296162 Dod02g2158 02 44773310 44775493 PCT