Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2045 ATGAGAGAGATAATAAGCATTCATATTGGACAAGCTGGAGTTCAGGTCGGGAATTCATGTTGGGAGCTATATTGCCTTGAACATGGCATTCAACCCGATGGGATGATGCCCAGTGATTTCGCAGAAGGTGTTGCACATGATGCTTTTAACACCTTCTTTAGTGAAAGTGGATCTGGCCACTTTGTCCCAAGGGCTTTATTTGTTGATCTAGAGCCTACAGTAGTTGATGAAGTAAGGTCTGGTCCTTATAGACAACTTTTTCATCCTGAGCAATTAATTTCTAGCAAGGAAGATGCTGCTAATAATTTTGCAAGGGGACACTACACAGTTGGGAAAGAGGTCGAAGAACTATGCTTGGATCGTATTCGTAAGTTAGCTGACAATTGCACTGGCTTGCAAGGGTTCTTGGTTTTCAATGCAGTTGGTGGTGGTACTGGTTCTGGTTTGGGATCATTGCTTTTGGAACGATTATCTGTAGATTATGGGAAAAAGTCAAAACTTGGCTTCATCATTTTTCCTTCTCCTCAGGTGGTATCTACTGCCATTGTTGAACCTTATAACACTGTTCTTTCCAATCATTCTCTTATTGAGCACACTGATGTGGTTGTGCTTTTGGATAATGAAGCAATATATGATATCTGCAGAAGATCATTAGATATAGAAAGACCAAGTTACACTAACCTGAATCGCTTAATATCTCAGTGTATCTCTTCAGTGACCACTTCCTTGAGATTTGATGGTGCTATCAATGTCGACATATCTGAGTTCCAGACTAACCTTGTGCCATATCCTCGCATCCATTTTATGCTTTCATCTTATGCCCCTATGATATCTTCTGTGAAAGCATATCACTGA 855 0.4047 MREIISIHIGQAGVQVGNSCWELYCLEHGIQPDGMMPSDFAEGVAHDAFNTFFSESGSGHFVPRALFVDLEPTVVDEVRSGPYRQLFHPEQLISSKEDAANNFARGHYTVGKEVEELCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFIIFPSPQVVSTAIVEPYNTVLSNHSLIEHTDVVVLLDNEAIYDICRRSLDIERPSYTNLNRLISQCISSVTTSLRFDGAINVDISEFQTNLVPYPRIHFMLSSYAPMISSVKAYH* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2045 284 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 142 148 IPR017975 GO:0005525|GO:0005874|GO:0007017
Dod02g2045 284 SUPERFAMILY Tubulin nucleotide-binding domain-like 1 246 IPR036525 -
Dod02g2045 284 SUPERFAMILY Tubulin C-terminal domain-like 250 279 IPR008280 -
Dod02g2045 284 ProSitePatterns Tubulin-beta mRNA autoregulation signal. 1 4 IPR013838 -
Dod02g2045 284 PRINTS Tubulin signature 95 106 IPR000217 GO:0005874|GO:0007017
Dod02g2045 284 PRINTS Tubulin signature 193 213 IPR000217 GO:0005874|GO:0007017
Dod02g2045 284 PRINTS Tubulin signature 108 132 IPR000217 GO:0005874|GO:0007017
Dod02g2045 284 PRINTS Tubulin signature 153 174 IPR000217 GO:0005874|GO:0007017
Dod02g2045 284 PRINTS Tubulin signature 179 192 IPR000217 GO:0005874|GO:0007017
Dod02g2045 284 PRINTS Tubulin signature 10 30 IPR000217 GO:0005874|GO:0007017
Dod02g2045 284 PRINTS Tubulin signature 134 152 IPR000217 GO:0005874|GO:0007017
Dod02g2045 284 PRINTS Tubulin signature 53 72 IPR000217 GO:0005874|GO:0007017
Dod02g2045 284 PRINTS Alpha-tubulin signature 215 227 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Dod02g2045 284 PRINTS Alpha-tubulin signature 45 58 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Dod02g2045 284 PRINTS Alpha-tubulin signature 148 160 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Dod02g2045 284 PRINTS Alpha-tubulin signature 88 101 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Dod02g2045 284 PRINTS Alpha-tubulin signature 120 128 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Dod02g2045 284 PRINTS Alpha-tubulin signature 161 172 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Dod02g2045 284 PRINTS Alpha-tubulin signature 275 284 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Dod02g2045 284 PRINTS Alpha-tubulin signature 18 33 IPR002452 GO:0005200|GO:0005525|GO:0005874|GO:0007017
Dod02g2045 284 PANTHER TUBULIN 1 284 IPR000217 GO:0005874|GO:0007017
Dod02g2045 284 SMART Tubulin_4 49 247 IPR003008 GO:0005525
Dod02g2045 284 Pfam Tubulin/FtsZ family, GTPase domain 3 214 IPR003008 GO:0005525
Dod02g2045 284 Gene3D Tubulin/FtsZ, GTPase domain 1 284 IPR036525 -
Dod02g2045 284 PANTHER TUBULIN ALPHA CHAIN 1 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2045 Dod-Chr2 37931846 37935634 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2045 K07374 - csv:101218331 503.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1968 01 55209651 55213417 Dod02g2045 02 37931846 37935634 PCT