Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g2033 ATGGAGAAAAAGTGGTTTTTGACATGGGTTTTGGTGGTTGGGGTGATGAGTTGGTGCGTGGAAGGGCTTGGAGTGAATTGGGGAACACAGTCTACACACCAGTTGAGGCCAGACACTGTGGTGCAGATGCTGAAGGACAACGGAATACAGAAGGTGAAGCTGTTTGATACAGATGCATCCACCATGAGTGCTCTGGTTGGGTCTGGGATTGAAGTCATGGTTGCCATTCCTAACGATCAGCTTGCTGCAATGAATAACTATGATCGGGCCATGCAATGGGTTCGGAAGAATGTTACTAGTTACAACTTCAAGGGCGGAGTTAACATCAAGTATGTAGCAGTTGGGAACGAACCATTTTTGAAATCCTATAATAATTCATTCTTGAATGCCACCTTGCCTGCACTACAGAACATTCAAAATGCTCTGAATGAGGGCGGCATTGGAGACATCGTAAAGGCTACGGTGCCTTTGAATGCTGATGTATATGAATCTCCACAGAATAATCCTGTTCCATCTGCAGGAACTTTTAGGCCTGATATAGCTGATCTCATGAATCAGATAGTGCAATTTTTGCACAACAATGGTGCCCCATTCACTGTAAACATTTACCCCTTCCTAAGTCTGCATGGGAATGATAATTTTCCTTTTGACTATGCCTTCTTTGATGGGTTAGCCAATCCCGTAAATGACAATGGAATTCAATACACGAACGTTTTTTATGCAAATTTTGATACCTTGGTTTGTGCTCTCAAAGCAGTGGGATATGGGGACATGCCCATTTTGGTAGGAGAAGTGGGATGGCCTACAGATGGAGACAAGAATGCCAATGTAGCCAATGCTGTAAGGTTCTATAATGGGCTTCTGCCAAGGCTTGCCGCAAATAAAGGCACCCCACGCAGACCTGGATATATTGAAGTTTATCTATTTGGACTAATAGATGAGGATGCCAAAAGCATTGCTCCAGGAAACTTTGAGCGACACTGGGGAATATTTAGGTATGATGGGCAGCCCAAGTTTCCAATGGACCTTTCGGGTCAAGGTCAAAACAAATTGCTAACAGGTGCTCAGAATGTGCATTACTTTGACCAAAAGTGGTGCATGTTCAATCCTAATGCCAAGGATCTAAGCAAACTTGCAGATAATATAAATTATGCTTGCACCTTTGGGGATTGCACTGCACTCGGATATGGGTCATCTTGCAACAACCTGGATGCCAATGGGAATGCCTCATATGCATTTAATATGTATTACCAGGTACAAAACCAGAATGACATGGCCTGCAATTTTGAAGGTTTAGCTGAAATTACTACGCAGAATATTTCAACACCTACTTGCAATTTTATTATTCAGATAATAATCCTTCGTCATCCTCTTGTTTGA 1380 0.4268 MEKKWFLTWVLVVGVMSWCVEGLGVNWGTQSTHQLRPDTVVQMLKDNGIQKVKLFDTDASTMSALVGSGIEVMVAIPNDQLAAMNNYDRAMQWVRKNVTSYNFKGGVNIKYVAVGNEPFLKSYNNSFLNATLPALQNIQNALNEGGIGDIVKATVPLNADVYESPQNNPVPSAGTFRPDIADLMNQIVQFLHNNGAPFTVNIYPFLSLHGNDNFPFDYAFFDGLANPVNDNGIQYTNVFYANFDTLVCALKAVGYGDMPILVGEVGWPTDGDKNANVANAVRFYNGLLPRLAANKGTPRRPGYIEVYLFGLIDEDAKSIAPGNFERHWGIFRYDGQPKFPMDLSGQGQNKLLTGAQNVHYFDQKWCMFNPNAKDLSKLADNINYACTFGDCTALGYGSSCNNLDANGNASYAFNMYYQVQNQNDMACNFEGLAEITTQNISTPTCNFIIQIIILRHPLV* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g2033 459 SMART X8_cls 364 447 IPR012946 -
Dod02g2033 459 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 2 452 IPR044965 GO:0004553|GO:0005975
Dod02g2033 459 Gene3D Glycosidases 22 350 - -
Dod02g2033 459 Pfam Glycosyl hydrolases family 17 23 342 IPR000490 GO:0004553|GO:0005975
Dod02g2033 459 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
Dod02g2033 459 Pfam X8 domain 364 433 IPR012946 -
Dod02g2033 459 Gene3D - 359 455 - -
Dod02g2033 459 PANTHER GLYCOSIDE HYDROLASE, FAMILY 17, X8 2 452 - -
Dod02g2033 459 SUPERFAMILY (Trans)glycosidases 23 341 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g2033 Dod-Chr2 37672360 37675642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g2033 9 452 Miscellaneous Gene Families AT1G64760 75.000 0.0 690
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g2033 - - gmx:102666963 801.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1936 01 54549944 54554147 Dod02g2033 02 37672360 37675642 PCT