Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g1077 ATGGGCAAACCCCAAGTTGAAGAGTCTGAAGCAGCCGGTAAACAGATCAGCAGTAACACAAAATGCAATTCTAAACAGATTGTAGAGAAAATGAACGAACGTCCTGAATGGTTACCTGAAGGCTGGAATGTGGATTTGAGAACTCGGAAAAGTGGCCCAAATATGGGATATGGATATAAGTGTTACATTAATCCACATGGAAAGAAATTCTACTCCAAACTAGATGTGTTGCGGTATCTTGAAACAATAAAGGGCAACAGCTGCACTTCCAGGAAGGAGGAGGGCCGCTACACCATGCATTCTCCAAGCAATGATGCGGTTGAGAAGTCCACGATTGAGAAACCCACAAGTGAGAAGTTCACAATTGAGAAGTCCACGGGTGAGGAGTCCACAGCTGATAAGTCCACAGATGAGGATTTGCCACCTGGCTGGATAAAAGAAGTCAAAATTAGGAAGGGTGGCAACGGCAATAAGAAAGATGTGTTCTATACAGATCCAGTGAGCGGATATGTATTCCGATCCAAGAAGGATGCACTGCGCTATCTTGAGTCTGGAGATATTAGTTCGTGTGCGATTAAACCAAATAAAAGACAAATCCAAGATGAAGACAAATTAGCTCCAACGTCAGCAAGCAAAAAGCAAAAACAAAAGCAGTCTGCTACTAAGCGACAACTTTTTGTTGGCAAAGAAATATCGGACCAAAGCAGCTTAGAATTGCCAGATTCTAAGAGATCAGGAAAAAGAAAAAATGTAAAGGGGTCTTCTGGAATGATTGATGCTCCTGTTCCTAGAGGTGAATCTGCTGGTCAGATTCAATTGCTAGAGAATGAAGTTGCAAACCCTCCCAAGATGCAGAAAGCATCTGCTCCAGATGATGTGCAAGAGAAGAATCATGTTGTGAATGTGATGGAGACTTCTGGTAAGAAGAATCACAGTAACCCTAGTCTATCCAAAAAGGAGTTGGCTCACCGGTCTTCCCGGAGACTTGCTGGGGTAGAACCTGACGAGTCGACTAGCAACCTGATCAACGAACAGACTCTTCCAGTCCCAAAAAGAAACTTGAGAAAAGGTAGAACTGTTTTAGATAGTGACTTAGCAAATAAATCATCTCAGCAGCTCAATGGTGTCCCAGAAAAAGGGAAAGTTGAAGACAGTAAGCTAGATAATCCTCATAATAGTCAGGCTTTGGCCTCTGAGGCTTGTGGTTTGAAAGAAAACAAATTGCTTGCGAGTGAGATTGGAAAAAGTGGAGAAATTTGTTCTAGCTCAAACAAATCCAGCAAGAAGAAAGAGCGTCAGATTCCTTGCCGGTCATCAAAAAGACTGGCTGGCTTTCAAGCTGAGCTGACAAGCGACTCACTCTCCTATGAAAGAGCTCCTGAATATAAAAGCAAAAAGTCCAAGGGGGAGGTCAATGCAGACTTGCATCATTCAGCAGTAGAGCTTGTAGAAACTGCATCAATAAATCGAGAGTCATCAAACAAAAGCAGAAAATCCCCTAAAATCCCAGCCATAACCAATGATCAACTGGAGAAGCATGAGAATGAAGATATGAATTATGAGAAATCAGAACCTCCACAATCTTTTGCATTTCACTACTCTTGGTCTGACCCAAGCTTGGAATTTGCAATTAAGACCCTCACTGGCACATTACCAGTTGAGGATTCAGTTGGTAACAGGCCCACTTTGATTTCTAAAACTGATAAGTTTCCTGAAAATAGTTTGTCTGAGAATGTTACAGGAAGCAGCAAAGACAAAAAGCCGAAGGTAAATTCAGGTAAATCCAAGAACAAGAAAGAGCTTAAAATGCCTACACGGCTGTCCAAGCGACTTGCTGGCCACGAACCTGATGTGCTGCCTGCTGAAAGAGCTCCTGAATATTCCACTAGAAAATCCTGCAAGGAAAAACCAAATGCAAATGTGATTTTAACTAATGGAGAGACTGTGAATCTTCATGATGAAGAATCCAAGGTCATTGTTAATGTATCTGACAGGTTGAAAACCAACGAACGTGGTGAATCATCAAATGGTGAGAAGTCATATGATGTACAAACTGTTCCCAATGAACAATTGCAGAGGCTTGAAGCTGAAATTATTAATGAAGAGAGATCAGAGCAACAGTTCCCCTTACAGTTTGGGGACTCCTGGTCAGATCCATGCCTAGAATTTGCAATTAAGACTCTCACTGGTTCTTTGCCCGTTGATGCTGCTGATGCTATCAATTTTCCTGTTATTACACCTGACGTTAATGACTCACCAAATAAGGAATTGCCTAAGAATGTGGTGCAGAAGAGCAATGAAGCTGCTGCTGATAACTCCAACCATTGCCAGACCAAGGAAGAGCTTAATACAGCTTGCGAGCCATCCAAACAACTGCTAGGCCAACCTGAGTTGAGAACCAGCACCACACCCTGTGAAAATGATCCTAAATTTGCAACTGGAGAGTCTTGCAGTGTTGAAGGCAATATAACGAGGAATTTGGATGGAGGACAATCCCTACATATGGAAGCTGGGAGTGTGACTCAAATTGATATAAACACACTGTTTTTTGATGAGCGATTCATGGAAGATGAACAGGTTCTTGGGGTTGAATCTATTGCGGAACAACCACAGCCTGAAACTGAAGCTACGAACCATGATAATTCTGAAAGAGACTTTTGTTCTTCATTTATGGATTCTTGGGCAGACCCATGCTTAGAATTTGCATTTAAGACTCTTACTGGAGCATTACCAGTAGAGGAAAATATATCAATGCAAGGATGTTTCCAGGAACCCGCTAACCGTCATGACCAGAGAGATGGGAGCTCAACATTGCCAGAAATTGGATCCTCCAGCATTTCTCAAAGTGATAGGGTAGAGAAATCCATGCCAGGGCAGCAGGCATCAATGAACTCTTCATTCCTCCCCCCAGAAATACCGAGCTCGAATGGTTGCACTGGGGTTGATACTCAAAATACTCAAAAACACTATTCTCAGTGGAATAATAATTTTCAAAGGTGA 3000 0.423 MGKPQVEESEAAGKQISSNTKCNSKQIVEKMNERPEWLPEGWNVDLRTRKSGPNMGYGYKCYINPHGKKFYSKLDVLRYLETIKGNSCTSRKEEGRYTMHSPSNDAVEKSTIEKPTSEKFTIEKSTGEESTADKSTDEDLPPGWIKEVKIRKGGNGNKKDVFYTDPVSGYVFRSKKDALRYLESGDISSCAIKPNKRQIQDEDKLAPTSASKKQKQKQSATKRQLFVGKEISDQSSLELPDSKRSGKRKNVKGSSGMIDAPVPRGESAGQIQLLENEVANPPKMQKASAPDDVQEKNHVVNVMETSGKKNHSNPSLSKKELAHRSSRRLAGVEPDESTSNLINEQTLPVPKRNLRKGRTVLDSDLANKSSQQLNGVPEKGKVEDSKLDNPHNSQALASEACGLKENKLLASEIGKSGEICSSSNKSSKKKERQIPCRSSKRLAGFQAELTSDSLSYERAPEYKSKKSKGEVNADLHHSAVELVETASINRESSNKSRKSPKIPAITNDQLEKHENEDMNYEKSEPPQSFAFHYSWSDPSLEFAIKTLTGTLPVEDSVGNRPTLISKTDKFPENSLSENVTGSSKDKKPKVNSGKSKNKKELKMPTRLSKRLAGHEPDVLPAERAPEYSTRKSCKEKPNANVILTNGETVNLHDEESKVIVNVSDRLKTNERGESSNGEKSYDVQTVPNEQLQRLEAEIINEERSEQQFPLQFGDSWSDPCLEFAIKTLTGSLPVDAADAINFPVITPDVNDSPNKELPKNVVQKSNEAAADNSNHCQTKEELNTACEPSKQLLGQPELRTSTTPCENDPKFATGESCSVEGNITRNLDGGQSLHMEAGSVTQIDINTLFFDERFMEDEQVLGVESIAEQPQPETEATNHDNSERDFCSSFMDSWADPCLEFAFKTLTGALPVEENISMQGCFQEPANRHDQRDGSSTLPEIGSSSISQSDRVEKSMPGQQASMNSSFLPPEIPSSNGCTGVDTQNTQKHYSQWNNNFQR* 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g1077 999 MobiDBLite consensus disorder prediction 485 503 - -
Dod02g1077 999 PANTHER OS04G0193200 PROTEIN 566 987 IPR038945 -
Dod02g1077 999 PANTHER OS04G0193200 PROTEIN 4 582 IPR038945 -
Dod02g1077 999 MobiDBLite consensus disorder prediction 332 347 - -
Dod02g1077 999 MobiDBLite consensus disorder prediction 582 621 - -
Dod02g1077 999 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 130 204 IPR001739 GO:0003677
Dod02g1077 999 MobiDBLite consensus disorder prediction 936 987 - -
Dod02g1077 999 MobiDBLite consensus disorder prediction 1 26 - -
Dod02g1077 999 SUPERFAMILY DNA-binding domain 33 88 IPR016177 GO:0003677
Dod02g1077 999 MobiDBLite consensus disorder prediction 193 392 - -
Dod02g1077 999 MobiDBLite consensus disorder prediction 864 884 - -
Dod02g1077 999 MobiDBLite consensus disorder prediction 484 525 - -
Dod02g1077 999 Pfam Methyl-CpG binding domain 31 85 IPR001739 GO:0003677
Dod02g1077 999 Pfam Methyl-CpG binding domain 134 185 IPR001739 GO:0003677
Dod02g1077 999 SUPERFAMILY DNA-binding domain 135 192 IPR016177 GO:0003677
Dod02g1077 999 Gene3D - 16 106 - -
Dod02g1077 999 MobiDBLite consensus disorder prediction 552 581 - -
Dod02g1077 999 MobiDBLite consensus disorder prediction 507 521 - -
Dod02g1077 999 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 28 104 IPR001739 GO:0003677
Dod02g1077 999 MobiDBLite consensus disorder prediction 414 438 - -
Dod02g1077 999 MobiDBLite consensus disorder prediction 313 331 - -
Dod02g1077 999 MobiDBLite consensus disorder prediction 925 987 - -
Dod02g1077 999 MobiDBLite consensus disorder prediction 552 634 - -
Dod02g1077 999 PANTHER OS04G0193200 PROTEIN 566 987 - -
Dod02g1077 999 PANTHER OS04G0193200 PROTEIN 4 582 - -
Dod02g1077 999 MobiDBLite consensus disorder prediction 93 143 - -
Dod02g1077 999 MobiDBLite consensus disorder prediction 196 210 - -
Dod02g1077 999 SMART TAM_2 133 201 IPR001739 GO:0003677
Dod02g1077 999 SMART TAM_2 29 109 IPR001739 GO:0003677
Dod02g1077 999 MobiDBLite consensus disorder prediction 11 26 - -
Dod02g1077 999 MobiDBLite consensus disorder prediction 211 231 - -
Dod02g1077 999 MobiDBLite consensus disorder prediction 111 143 - -
Dod02g1077 999 Gene3D - 111 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g1077 Dod-Chr2 13440181 13449238 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g1077 - - aip:107643060 1157.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g1077 02 13440181 13449238 Dod02g1077 02 13440181 13449238 ECH
Dod02g1077 02 13440181 13449238 Dod04g2689 04 50859714 50865054 PCT