Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dod02g0984 | ATGGCAAAGAGCTACTTCAAACAAGAGCACGATCTTGAGAAGAGAAGAGCTGAGGCAGCTAGGATTAGGGAGAAATACCCAGACCGGATTCCGGTAATTGTGGAAAAGGCTGAAAGAAGTGACATCCCAAGTATTGACAAGAAGAAATACCTTGTTCCCGCTGACCTGACTGTCGGACAGTTTGTCTATGTTATCCGCAAAAGGATTAAATTAAGTGCAGAAAGGGCCATCTTTATATTTGTGGACAACATCCTTCCGCCTACAGGAGCAATTATGTCTGCCATATATGAAGAGAAGAAGGATGAAGATGGGTTTCTTTATGTTACATACAGCGGCGAGAACACCTTTGGCGACCTGACTTCCCATTTCCAGTAG | 375 | 0.44 | MAKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSAERAIFIFVDNILPPTGAIMSAIYEEKKDEDGFLYVTYSGENTFGDLTSHFQ* | 125 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dod02g0984 | 124 | Gene3D | - | 1 | 117 | - | - | |
| Dod02g0984 | 124 | PANTHER | AUTOPHAGY-RELATED PROTEIN | 1 | 117 | - | - | |
| Dod02g0984 | 124 | Pfam | Autophagy protein Atg8 ubiquitin like | 14 | 117 | IPR004241 | - | |
| Dod02g0984 | 124 | CDD | Ubl_ATG8 | 12 | 114 | - | - | |
| Dod02g0984 | 124 | SUPERFAMILY | Ubiquitin-like | 3 | 117 | IPR029071 | - | |
| Dod02g0984 | 124 | PANTHER | MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED | 1 | 117 | IPR004241 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dod02g0984 | Dod-Chr2 | 12443309 | 12447038 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Dod02g0984 | K08341 | - | gmx:100499835 | 230.72 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Dod02g0984 | 02 | 12443309 | 12447038 | Dod05g1384 | 05 | 37948376 | 37951903 | PCT |