Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0836 ATGCTCACAGCAGCATTCGTCCTTCCCCTATCTTTTGCTTTTTCAAAAGCTCCCTGTATAAATAAGATACTTCCCTTCCTCCACTTGCATTCCAAATTAACCAATAATTTTCTCAATTACACGCATCCCAACATGTCCATCGCAGTCTTTTTACCTTATAGAAATGTTGGCGTCTTCCTTTTACTATCATGGGCTCTTATACCTGCTCTATGTGTTTGGGGACGACCTGCCACTTTTCTTCAAGACTTTCGAGTCACATGGTCTGACTCCCACATCAAGCAAATTAATCAAGGCAGGGAAATACAACTCATTCTAGACCAAAACTCTGGATGCGGGTTTGCTTCTAAGAGTAAGTACATGTTTGGCCGTGTTAGTATAAAGATCAAGCTCATCGCCGGAGACTCTGCTGGGACAGTCACTGCATTTTATATGAACTCTGACACCGATGCCATTCGCGATGAGCTGGATTTCGAGTTCTTGGGAAACCGTAGTGGCCAGCCTTACACGGTTCAGACAAACATCTATGCTCACGGAAAGGGGGACAGAGAACAGAGGGTCAACCTCTGGTTTGATCCTTCTGCCGACTTCCACACTTACACTATTCTCTGGAATCATCACCACATTGTGTTCTCCGTTGATGGGTTTCCCATTAGAGTGTACAAGAACAATTATGCAACGAAGGGGATCCCCTACCCAGCGATGCAAGCAATGGGAGTGTATTCCACTTTGTGGGACGCCGATAACTGGGCAACAAGAGGTGGGCTTGAGAAGATTGATTGGAGCAAGGCACCATTCTACGCTTATTACAAGGACTTTGACATTGAAGGATGCCCGGTACCAGGTCCTGCTAGCTGTTCCTCGAACCCAAGAAACTGGTGGGAGGGTGCTGCTTACCAGGAACTTAATGCCATTGAAGCCCGAAGCGAGTCACAATTCTTTGTGAAACAAAATAATTCCGCAGTTTCTCTGCAAGCAAAGTACAAATGGTGTTGGCCAATGAGATGA 1005 0.4567 MLTAAFVLPLSFAFSKAPCINKILPFLHLHSKLTNNFLNYTHPNMSIAVFLPYRNVGVFLLLSWALIPALCVWGRPATFLQDFRVTWSDSHIKQINQGREIQLILDQNSGCGFASKSKYMFGRVSIKIKLIAGDSAGTVTAFYMNSDTDAIRDELDFEFLGNRSGQPYTVQTNIYAHGKGDREQRVNLWFDPSADFHTYTILWNHHHIVFSVDGFPIRVYKNNYATKGIPYPAMQAMGVYSTLWDADNWATRGGLEKIDWSKAPFYAYYKDFDIEGCPVPGPASCSSNPRNWWEGAAYQELNAIEARSESQFFVKQNNSAVSLQAKYKWCWPMR* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0836 334 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 6-RELATED 58 308 - -
Dod02g0836 334 CDD GH16_XET 77 307 IPR016455 GO:0010411|GO:0016762|GO:0042546
Dod02g0836 334 Pfam Glycosyl hydrolases family 16 81 262 IPR000757 GO:0004553|GO:0005975
Dod02g0836 334 Gene3D - 71 319 - -
Dod02g0836 334 PANTHER XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 8-RELATED 58 308 IPR044791 GO:0004553
Dod02g0836 334 SUPERFAMILY Concanavalin A-like lectins/glucanases 81 307 IPR013320 -
Dod02g0836 334 ProSiteProfiles Glycosyl hydrolases family 16 (GH16) domain profile. 35 269 IPR000757 GO:0004553|GO:0005975
Dod02g0836 334 ProSitePatterns Glycosyl hydrolases family 16 active sites. 154 164 IPR008263 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0836 Dod-Chr2 10782404 10784884 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0836 58 307 Glycoside Hydrolase AT5G65730 76.000 7.74e-143 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0836 K08235 - gmx:100791974 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0836 02 10782404 10784884 Dod02g0836 02 10782404 10784884 ECH
Dod02g0836 02 10782404 10784884 Dod05g1211 05 34479787 34481910 PCT