Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0437 ATGGAAAAGACAATGACTTCAGTTTCAGAGTCTCTACATGCTTTCCTCTTGCTTTGTTTATGTGGCACAGTAGTACTAGTTTCTGCCAAGTACAACACTGGAGCAGGTGTTGTGCCATGGAAACTGAATGTTCATCTTGTTGCACATTCCCATGATGATGTTGGTTGGCTTAAGACCGTTGACCAATACTATGTTGGATCAAACACCAGTATTCAGGAGGCATGTGTTGAGAATGTGCTGGACTCGGTGGTTATGTCCCTGCAGAGGGACCCAAATAGAAAATTTGTGTTTGCCGAGATGGCCTTTTTCCATAGATGGTGGGTGGAACAAAGTCCAGAAACAAAGGCACAAGTGAGAAAGCTTGTGTATGCTGGGCAGCTAGAATTTGTAAACGGTGGCTGGTGCATGCATGATGAAGCCACGACCCACTACATTGACATGATCGATCAAACCACTCTTGGTCATCTTTTCATCAAAGAACAATTCAACAAGGCCCCTCGCGCTGGGTGGCAGATTGATCCATTTGGGCATTCTGCTGTTCAAGCTTATCTCCTGGGTGCTGAGCTTGGATTTGACTCTGTACACTTCGCTAGGATTGATTACCAGGATAGAGCTCGGCGCAAAGTTGATAAGTCGCTCGAAGTCGTGTGGCGTGGATCTAAAACATTTGGCTCTTCATCTCAGATCTTTGCCAATGCTTTTCCCGTTCATTATAGTCCCCCATCAGGTTTTCATTTTGAAGTCGATGATGACTTTGCTCACATCCAGGACGACCCCCTTCTATTTGATTACAATGTTGAAGAGCGAGTCAAGGACTTTATTGTTGCTGCTATTGCACAAGCAAAAGTGACTAGAACAAACCACATCATGTGGACAATGGGCGATGATTTCCAGTACCAATATGCAGAGTCATGGTTCAAGCAGATGGATAAACTAATCCACCATGTTAATAAGGATGGCAAAGTGAATGCTTTATATTCCACACCATCAATTTACACCGACGCAAAATATGCATCAAATCAATCATGGCCTCTGAAAACCAATGACTACTTTCCTTATGCAGATGGGGTAAATGCTTATTGGACGGGTTATTTCACTAGTCGCCCAGCCTTTAAGAGATACGTCAGGATGCTAAGTGGATACTATTTGGCTGCACGCCAACTTGATTTTTTGGCTGGAAAGAAAGCCAGTGCTATTGGCCCGACTTCTGACCTTGGAGAGGCTCTTGGAGTTGCACAGCACCATGATGCTGTTTCTGGTACTGCCAAACAGCATACAACTAATGACTATGCAAAACGACTCGCCATTGGAGCCTCTAAGGCTGAAGCTGTTATTAGTTCTTCTTTGGCTTGTCTTGCTAGCAAGAAACCAGGATTCCAATGCTCAGCACCTGCATCAGTATTTTCCCAGTGTCAGCTACTCAATATTAGTTACTGCCCTCCAACAGAACACAGTATTCCACAAGCTAAGAGTTTGGTTTTAGTGGTGTATAACCCACTTGGATGGAATCGTACTGATATTGTCAGAATACCAGTCAATGATGCTAATCTCGTTGTCAAAGATTCATTTGGAAATAACCTTGAAGCACAATATGTGGATGTGGATGATATCACAACAAACTTAAGCGGACTTTATGTCAAGGCCTATTTGGGGTTGCCTCCAAAACAAGCCCCAAAGTACTGGCTTCTGTTTCAGGTCTCAGTGCCTCCACTTGGATGGATTACGTACTTCATTTCTAAAGCAGGAAGAAAAGCTAAAAGTAGAAATGGAGAATCAAGCACTCAGCAAAACAAGACCATTGAAATAGGACCTGGAAATTTAAAGATGTCCTTTTCTTCAGAGTCTGGACAACTTGAACGAATGTATAATTCCAGAACTGGAGCTGATATACCAATTCAGCAAAGCTATCTCTGGTATGGCTCTAGTGAAGATGGGGATCAGGCTTCTGGTGCTTATATATTCCGGCCCAATGGATCCCCTCCAAGTATTGTTTCAAGATCAGTGCCCTCCAAGGTAATCCGAGGACCACTAGTTCATGAGGTTCATCAGAAGTTTAGTTCTTGGATTTACCAGGTCACTAGGCTTTACAAAGACAAAGAGCATGCTGAAATGGAATACACTATTGGTCCGATTCCCACGGATGATGGATTAGGGAAAGAGGTGATCACGCAAATGACAGCAAATATGGTTACAAACAAGGAGTTTTATACTGATTCTAACGGAAGAGATTTTCTGAAACGGGTTCTAAATCAAAGGGAAGATTGGCCCCTTCAAGTTAATCAACCTGTAGCAGGAAACTACTATCCCCTTAATCTTGGAATTTATATTAAGGATAAGAAATCTGAATTCTCAGTCCTGGTTGATCGTGCCACTGGTGGAGCCAGCATCAAAGATGGTGAGGTGGAACTAATGCTTCATAGGTACATTGCTAAACAACATATGCAAGTTTTAATATTATTTCCTTGTATACAAGCTTCTCATAGCTGA 2487 0.4274 MEKTMTSVSESLHAFLLLCLCGTVVLVSAKYNTGAGVVPWKLNVHLVAHSHDDVGWLKTVDQYYVGSNTSIQEACVENVLDSVVMSLQRDPNRKFVFAEMAFFHRWWVEQSPETKAQVRKLVYAGQLEFVNGGWCMHDEATTHYIDMIDQTTLGHLFIKEQFNKAPRAGWQIDPFGHSAVQAYLLGAELGFDSVHFARIDYQDRARRKVDKSLEVVWRGSKTFGSSSQIFANAFPVHYSPPSGFHFEVDDDFAHIQDDPLLFDYNVEERVKDFIVAAIAQAKVTRTNHIMWTMGDDFQYQYAESWFKQMDKLIHHVNKDGKVNALYSTPSIYTDAKYASNQSWPLKTNDYFPYADGVNAYWTGYFTSRPAFKRYVRMLSGYYLAARQLDFLAGKKASAIGPTSDLGEALGVAQHHDAVSGTAKQHTTNDYAKRLAIGASKAEAVISSSLACLASKKPGFQCSAPASVFSQCQLLNISYCPPTEHSIPQAKSLVLVVYNPLGWNRTDIVRIPVNDANLVVKDSFGNNLEAQYVDVDDITTNLSGLYVKAYLGLPPKQAPKYWLLFQVSVPPLGWITYFISKAGRKAKSRNGESSTQQNKTIEIGPGNLKMSFSSESGQLERMYNSRTGADIPIQQSYLWYGSSEDGDQASGAYIFRPNGSPPSIVSRSVPSKVIRGPLVHEVHQKFSSWIYQVTRLYKDKEHAEMEYTIGPIPTDDGLGKEVITQMTANMVTNKEFYTDSNGRDFLKRVLNQREDWPLQVNQPVAGNYYPLNLGIYIKDKKSEFSVLVDRATGGASIKDGEVELMLHRYIAKQHMQVLILFPCIQASHS* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0437 828 Gene3D Glycoside hydrolase family 38, central domain 402 459 IPR037094 GO:0004559|GO:0006013
Dod02g0437 828 Pfam Alpha mannosidase middle domain 359 452 IPR015341 GO:0004559|GO:0006013
Dod02g0437 828 Pfam Glycosyl hydrolases family 38 C-terminal domain 603 808 IPR011682 GO:0004559|GO:0006013
Dod02g0437 828 SUPERFAMILY Families 57/38 glycoside transferase middle domain 359 460 IPR028995 -
Dod02g0437 828 CDD GH38N_AMII_LAM_like 42 318 - -
Dod02g0437 828 PANTHER ALPHA-MANNOSIDASE 12 812 - -
Dod02g0437 828 Pfam Glycosyl hydrolases family 38 N-terminal domain 43 354 IPR000602 GO:0004559|GO:0006013
Dod02g0437 828 Gene3D - 599 813 - -
Dod02g0437 828 SUPERFAMILY Glycoside hydrolase/deacetylase 31 356 IPR011330 GO:0005975
Dod02g0437 828 Gene3D Glycoside hydrolase family 38, central domain 323 401 IPR037094 GO:0004559|GO:0006013
Dod02g0437 828 Gene3D - 470 581 IPR013780 -
Dod02g0437 828 SMART Alpha_mann_mid_2 359 434 IPR015341 GO:0004559|GO:0006013
Dod02g0437 828 PANTHER ALPHA-MANNOSIDASE 12 812 - -
Dod02g0437 828 Gene3D Glycoside hydrolase 38, N terminal domain 42 322 IPR027291 -
Dod02g0437 828 SUPERFAMILY Galactose mutarotase-like 467 808 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0437 Dod-Chr2 5780513 5788129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod02g0437 11 807 Glycoside Hydrolase AT3G26720 60.648 0.0 1020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0437 K01191 - gmx:100806041 1359.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0437 02 5780513 5788129 Dod02g0437 02 5780513 5788129 ECH
Dod02g0437 02 5780513 5788129 Dod05g0164 05 2075119 2086732 PCT