Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod02g0386 ATGGCGTCCACTGCACGAAGAACCAAGCCGCTCCTCACGCGCCTCGTCACCGCTTCCACGCGCCTCAATCAAGCTCGCTCAGTTACCTACATGCCCCGACCCGGCGACGGCGCCCCGCGCGCGGTCACCCTGATCCCCGGCGACGGGATCGGCCCTCTGGTGACCGGCGCGGTGGAGCAGGTGATGGAGGCGATGCACGCGCCGGTGTACTTCGAGAAGTTTGACATCCACGGCGACATGAAGGCGGTGCCGGCGGCGGTGATCGAGTCGATCAGGAAGAACAAGGTGTGCCTGAAGGGGGGGTTGGTGACTCCGATGGGAGGCGGCGTGAGCTCGCTGAACGTGCAGCTGAGGAAGGAGCTGGACCTGTACGCGTCGCTGGTGAACTGCTTCAACCTCCCTGGGCTCCCCACTCGCCACGAAAACGTGGACATCGTTGTGATCAGGGAGAACACTGAAGGCGAGTACTCTGGACTCGAGCACGAGGTCGTTCCCGGCGTCGTTGAAAGCCTGAAGGTAATAACGAAGTTCTGTTCAGAGCGCATTGCTAAATATGCATTCGAGTATGCTTACTTGAATAACAGAAAGAAGGTGACTGCTGTGCACAAAGCAAACATTATGAAACTTGCAGATGGTTTATTCTTGGAATCATGTCGTGAGGTTGCCACAAAGTATCCTGGAATCAAGTATAATGAAATCATTGTAGATAATTGCTGCATGCAGCTTGTAGCAAAACCTGAGCAGTTTGATGTCATGGTAACTCCCAACCTTTATGGAAATCTCGTTGCAAATACAGCAGCAGGTATTGCTGGAGGCACTGGAGTCATGCCAGGAGGTAATGTTGGGGCTGAGCATGCAGTGTTTGAGCAAGGTGCTTCGGCAGGAAATGTTGGTAGTGAGAAAGAAGTGGAACAAAAGAGAGCCAATCCTGTGGCACTGCTGCTCTCGTCCGCCATGATGCTTAGGCATCTTCAATTTCCTGCATTTGCTGACCGACTGGAAACCGCTGTGAAACGAGTCATTCTGGAGGGCAAACACCGGACAAAGGACCTTGGAGGGACGAGCACCACTCAGGAGGTTGTTGATGCAGTGATTGATGGTTTGGACTGA 1110 0.5414 MASTARRTKPLLTRLVTASTRLNQARSVTYMPRPGDGAPRAVTLIPGDGIGPLVTGAVEQVMEAMHAPVYFEKFDIHGDMKAVPAAVIESIRKNKVCLKGGLVTPMGGGVSSLNVQLRKELDLYASLVNCFNLPGLPTRHENVDIVVIRENTEGEYSGLEHEVVPGVVESLKVITKFCSERIAKYAFEYAYLNNRKKVTAVHKANIMKLADGLFLESCREVATKYPGIKYNEIIVDNCCMQLVAKPEQFDVMVTPNLYGNLVANTAAGIAGGTGVMPGGNVGAEHAVFEQGASAGNVGSEKEVEQKRANPVALLLSSAMMLRHLQFPAFADRLETAVKRVILEGKHRTKDLGGTSTTQEVVDAVIDGLD* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod02g0386 369 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 41 367 - -
Dod02g0386 369 PANTHER NAD-DEPENDENT ISOCITRATE DEHYDROGENASE C,1 19 366 - -
Dod02g0386 369 Pfam Isocitrate/isopropylmalate dehydrogenase 42 364 IPR024084 -
Dod02g0386 369 Gene3D Isopropylmalate Dehydrogenase 28 367 - -
Dod02g0386 369 PANTHER DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE 19 366 - -
Dod02g0386 369 SMART Iso_dh_2 41 364 IPR024084 -
Dod02g0386 369 TIGRFAM mito_nad_idh: isocitrate dehydrogenase, NAD-dependent 38 366 IPR004434 GO:0006099
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod02g0386 Dod-Chr2 5178607 5183975 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod02g0386 K00030 - gmx:100778831 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod02g0386 02 5178607 5183975 Dod02g0386 02 5178607 5183975 ECH
Dod02g0386 02 5178607 5183975 Dod05g0113 05 1604800 1609842 PCT