Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2936 ATGGCTAATTATCTTCAGATTCTCTGCACACTCTGTCTCTTCTCTCTTACCACATTCACTTCATCGTCATCATCCAATCCGAACACCATAACACTCTCTCTTTCTCCCACATTCACCAAACACCCATCCTCAGATCCACTCCAAACTATCAAGCTCGCTTCCTCTGCTTCTCTCTCCAGAGCCCACCACCTCAAGCACCGCCAACCCAACCCCACTCCCGCCAGCGCCGTCACCACACCGGTGTTCCCCAAGAGCTACGGCGGCTACTCCATAGATCTCCAATTCGGAACCCCACCACAAACCTCATCATTCTTATTGGACACAGGAAGCAGCCTCGTCTGGTTCCCCTGCACCTCCCGCTACCTCTGCTCCAACTGCAACTTCCCTAACATCGACCCTTCCAAGATCCCAACCTTCATTCCCAAGAACTCATCCACTGCTAAAATCGTCGGATGCACCAACCCCAAATGCAGCTGGTTTTTCGGCCCCGATGTTCAATCCCGGTGCCAAGGTTGCAACCCCGGATCCAACAACTGTACCGTGAATTGCCCTGCTTACATCATCCAATACGGTTTAGGCTCCACAGCGGGTCTATTACTCTCGGAAAACCTCGATTTACCCGGGAAAATCGTGCAAGATTTTCTCGTCGGGTGCTCCGTCTTCTCCGTCCGACAACCGTCCGGGATCGCCGGGTTCGGCCGCGGGAAGGAGTCGCTGCCGTCGCAGTTGGGACTCAAGAGATTCTCTTACTGTTTGGTCTCTCACCGGTTCGACGACTCGCCGGAAAACAGCGACCTCGTTCTTCAGATTAGCTCCTCCGGCGGAACCAAGACCGCCGGCGTCAGCTACACGCCGCTCCGTGCGAACCCCACTACGGCGAACAACTCCGCATTCGGGGTTTACTATTACGTCAATCTCCGGAAAATCCTGGTCGGCGGCGAGAAGGTGAAGATCCCGTTCGCGTTTTTGGAACCAGGTTCAGACGGCAATGGAGGCACGATCGTTGACTCCGGGTCAACGTTCACGTTCATGGAGAGGCCAGTGTTCGAGCTAGTGGCGAAGGAGTTCGAGAAGCAGATGAAGAATTTCACGAGGGCGAAGGACGTTGAGGAGCAATCAGGGTTGAGCCCTTGCTTCAATTTCACTGGCCTCAAAACGGTGTCGATTCCGGAACTCACTTTTCAGTATAAAGGTGGAGCTAAAATGACGCTGCCCGTAGCGGATTATTTCTCGTTGGTGGGGGGAGCGCGGGTGGCGTGCCTCACGATCGTCTCCGACAACGGCACCACCGGTCCGGTGAGCGCAGGTGGACCGTCGATCATATTGGGGAACTACCAGCAGCAGAATTTCTACGTGGAATATGATTTGGAGAATCAGAGGTTCGGTTTTAAGCCTCAGAATTGCCAAAGGAATAATGCTTAG 1422 0.5394 MANYLQILCTLCLFSLTTFTSSSSSNPNTITLSLSPTFTKHPSSDPLQTIKLASSASLSRAHHLKHRQPNPTPASAVTTPVFPKSYGGYSIDLQFGTPPQTSSFLLDTGSSLVWFPCTSRYLCSNCNFPNIDPSKIPTFIPKNSSTAKIVGCTNPKCSWFFGPDVQSRCQGCNPGSNNCTVNCPAYIIQYGLGSTAGLLLSENLDLPGKIVQDFLVGCSVFSVRQPSGIAGFGRGKESLPSQLGLKRFSYCLVSHRFDDSPENSDLVLQISSSGGTKTAGVSYTPLRANPTTANNSAFGVYYYVNLRKILVGGEKVKIPFAFLEPGSDGNGGTIVDSGSTFTFMERPVFELVAKEFEKQMKNFTRAKDVEEQSGLSPCFNFTGLKTVSIPELTFQYKGGAKMTLPVADYFSLVGGARVACLTIVSDNGTTGPVSAGGPSIILGNYQQQNFYVEYDLENQRFGFKPQNCQRNNA* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2936 473 Pfam Xylanase inhibitor C-terminal 302 464 IPR032799 -
Dod01g2936 473 Gene3D Acid Proteases 269 473 IPR021109 -
Dod01g2936 473 Pfam Xylanase inhibitor N-terminal 89 256 IPR032861 -
Dod01g2936 473 Coils Coil 353 373 - -
Dod01g2936 473 ProSiteProfiles Peptidase family A1 domain profile. 89 464 IPR033121 -
Dod01g2936 473 PRINTS Pepsin (A1) aspartic protease family signature 95 115 IPR001461 GO:0004190|GO:0006508
Dod01g2936 473 PRINTS Pepsin (A1) aspartic protease family signature 440 455 IPR001461 GO:0004190|GO:0006508
Dod01g2936 473 PRINTS Pepsin (A1) aspartic protease family signature 333 344 IPR001461 GO:0004190|GO:0006508
Dod01g2936 473 Gene3D Acid Proteases 73 261 IPR021109 -
Dod01g2936 473 PANTHER OS07G0603500 PROTEIN-RELATED 8 468 - -
Dod01g2936 473 PANTHER BNACNNG47670D PROTEIN 8 468 - -
Dod01g2936 473 CDD pepsin_A_like_plant 88 468 IPR034161 -
Dod01g2936 473 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 104 115 IPR001969 GO:0004190|GO:0006508
Dod01g2936 473 SUPERFAMILY Acid proteases 84 469 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2936 Dod-Chr1 69823818 69825703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod01g2936 81 470 Miscellaneous Gene Families AT1G44130 24.105 8.68e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2936 - - gmx:100805927 671.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2936 01 69823818 69825703 Dod07g0288 07 3585912 3587723 PCT