Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g2399 ATGGCTGGGCTGGGACGCACGAGAATCGCCCTTCCCTCTCAGTTCGCTTCCGCGTTCAGCTTCCCTAGGAAGTTCGCCGTTTGCCTATCATCCAACGGCGTCGTTTTCTTCGGCGATGGACCTTACAGGTTCCTTCTCAACGTGGTGTTAGATTCTAAGTCTCTAACGTACACGCCATTGTTTATTAACCCTGTGAGCACCGCTTCGGCTTTCTCCCAGGGAGAGCCTTCCGCTGAGTACTTCATTGGAGTGAGTTCCATTAAGGTTGACCAGAACGTGGTCAAAGTCAACCGTTCTTTGTTGACCATTGATAAGAATAGTGGTTTCGGTGGAACCAAGATCAGCACCGTGAACCCTTACACTGTATTGGAGGATTCGATCTTCAAGGCTGTGACTGAGGCTTTTGTGAATGCTTCTGCTGCTAGGAACATTTCGAGGGTGGCTTCCGTGAAACCCTTTGAAGTGTGCTTTAGTAGCAAGAACGTGTTCGGCACGCGGTTGGGGGCGGCGGTGCCTACTATTGAGCTTGTTCTGCAGAATCAGAACGTGAGTTGGAGAATCTTTGGTGCTAATTCTGTTGTGAGTGTGAATGATGATGTTATATGTCTTGCGTTTGTGAATGGTGGGAAGAGTCCAAGGACTTCGATTGTGATCGGAGGGTACCAGCTGGAGGACAATCTTTTGCAGTTTGATTTGGCTGCTTCTAGATTGGGGTTCAGCTCTTTGCTCTTTGGAAGGCAAACCACGTGTGCAAACTTCAACTTCACCCCCACCGCATAA 780 0.4923 MAGLGRTRIALPSQFASAFSFPRKFAVCLSSNGVVFFGDGPYRFLLNVVLDSKSLTYTPLFINPVSTASAFSQGEPSAEYFIGVSSIKVDQNVVKVNRSLLTIDKNSGFGGTKISTVNPYTVLEDSIFKAVTEAFVNASAARNISRVASVKPFEVCFSSKNVFGTRLGAAVPTIELVLQNQNVSWRIFGANSVVSVNDDVICLAFVNGGKSPRTSIVIGGYQLEDNLLQFDLAASRLGFSSLLFGRQTTCANFNFTPTA* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g2399 259 Pfam Xylanase inhibitor C-terminal 79 240 IPR032799 -
Dod01g2399 259 Pfam Xylanase inhibitor N-terminal 1 39 IPR032861 -
Dod01g2399 259 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 1 258 - -
Dod01g2399 259 Gene3D Acid Proteases 40 257 IPR021109 -
Dod01g2399 259 Gene3D Acid Proteases 1 39 IPR021109 -
Dod01g2399 259 PANTHER ASPARTYL PROTEASE-RELATED 1 258 IPR001461 GO:0004190|GO:0006508
Dod01g2399 259 SUPERFAMILY Acid proteases 2 250 IPR021109 -
Dod01g2399 259 ProSiteProfiles Peptidase family A1 domain profile. 1 240 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g2399 Dod-Chr1 62711348 62712127 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g2399 - - pop:7480705 396.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g2399 01 62711348 62712127 Dod01g3398 01 75147684 75149576 ECH
Dod01g2399 01 62711348 62712127 Dod01g2399 01 62711348 62712127 ECH
Dod01g2399 01 62711348 62712127 Dod07g0532 07 7074853 7076265 PCT