Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod01g1764 ATGTCTGTGAACAATAGTAACCCTTCTAAGGGCCCTGGGGCCTCTTCCTCATCGTTTGGAAATGCTGGAATAGGATCCCAACCTGTGCCCGGATACTCACATTCCCAAACAGGTCAGATTCCTTCTGGTTTTCAGGGTCAGTTTCCGCTGTCCCAAGCCCATGCCATTGCCCAGGCACAGTCCAAGGCTCAAGCCCATGCCCAGGCTCAAGTACAAGCAGCTCACGCTCAGTTCCAGGCTCAGTTACAAGCTCATGGGCTGAGCCTTAATCAGAATCTTGGGGTGCCTCCTGGAAGCTCCAGTAGCAAGCGTTTCCCTCTGAAGCCCCCTATTCGCCCCGGCTTTTCTCCTCCGAACAACACCATGTCGCCGATGAAGCCGATGATGGAACTCACGCCTGCTGCTCGGAGAAAGAGGCAGAAGCTCCCCGAGAAACAGCTTCAGGATAAAGTGGCTGCTATTTTGCCCGAATCTGCTCTGTACACACAGCTTCTCGAGTTTGAGGCTCGTGTCGATTCTGCGCTTGCTAGAAAGAAGGTTGACATCCAGGAAGCGCTTAAAAACCCTCCTTGTATACAGAAAACGCTTCGTATCTACGTGTTTAACACTTCCGCCAATCAAACTCGCACGATTCCTCAGAAGCCAAATGCTGAGCCTCCTAGCTGGACACTTAAGATAGTTGGGAGGATATTGGAAGATGGGGAAGACCCTGATCAGCCAGGTGTTGTTCAGAGATCTTCTCCGATGTATCCGAAATTCTCGTCTTTCTTCAAAAGGGTAACCATTTCTCTGGACCAGAGACTGTATCCTGACAATCACATCATTGTATGGGAGAATTCTCGATCACCTGCTCCTCATGAAGGTTTTGAAGTGAAGAGGAAAGGGGATAAAGAATTTGTAGCAAATATACGGTTGGAGATTAATTATGTGCCTGAGAAGTTTAAGCTTTCACCAGCATTGACAGAAGTACTTGGTATTGAGGTTGACACCCGCCCAAGAATTATTGCTGCAATCTGGCATTATGTGAAGGCCAGGAAATTACAGAACCCAAATGACCCTTCTTTCTTTCACTGCGATCCGCCCCTTCAGAAAGTATTTGGGGAAGAAAAGATGAAGTTTACGATGGTTTCACAGAAGATATCGAATCATTTGTTCCCTCCGCAGCCTATACTTTTGGAGCACAAGATCAGGCTCGCAGGAAATAGTCCAGTTGGAACTGCTTGTTATGATGTGATGGTTGATGTTCCTTTTCCTATTCAGAGGGAGTTGTCTGCATTATTGGCCAATGTGGAGAAGAACAAAGAGATTGATGCATGTGATGAAGCCATATGTGGAATTATTAGAAAAATCCATGAGCACCGTAGGAGACGAGCATTCTTTGTTGGTTTCAGTCAATCTCCAGTGGAATTTATTAATGCCTTGATTGAATCTCAGAGCAGGGATCTGAAACTTGTAGCTGGAGAACCTAGTCGTAATGCTGAAACAGAGCGTAGATCAGATTTCTTTAACCAACCATGGGTTGAAGATGCTGTTATTCGATATTTGAATCGCAAACCAGCCCCTGGCAGTGATGCTCCAGGAAGCACATGA 1590 0.4667 MSVNNSNPSKGPGASSSSFGNAGIGSQPVPGYSHSQTGQIPSGFQGQFPLSQAHAIAQAQSKAQAHAQAQVQAAHAQFQAQLQAHGLSLNQNLGVPPGSSSSKRFPLKPPIRPGFSPPNNTMSPMKPMMELTPAARRKRQKLPEKQLQDKVAAILPESALYTQLLEFEARVDSALARKKVDIQEALKNPPCIQKTLRIYVFNTSANQTRTIPQKPNAEPPSWTLKIVGRILEDGEDPDQPGVVQRSSPMYPKFSSFFKRVTISLDQRLYPDNHIIVWENSRSPAPHEGFEVKRKGDKEFVANIRLEINYVPEKFKLSPALTEVLGIEVDTRPRIIAAIWHYVKARKLQNPNDPSFFHCDPPLQKVFGEEKMKFTMVSQKISNHLFPPQPILLEHKIRLAGNSPVGTACYDVMVDVPFPIQRELSALLANVEKNKEIDACDEAICGIIRKIHEHRRRRAFFVGFSQSPVEFINALIESQSRDLKLVAGEPSRNAETERRSDFFNQPWVEDAVIRYLNRKPAPGSDAPGST* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod01g1764 529 CDD SWIB_like 316 384 - -
Dod01g1764 529 MobiDBLite consensus disorder prediction 1 46 - -
Dod01g1764 529 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 87 526 - -
Dod01g1764 529 Gene3D SWIB/MDM2 domain 307 390 IPR036885 -
Dod01g1764 529 ProSiteProfiles SWIB/MDM2 domain profile. 309 386 IPR003121 -
Dod01g1764 529 SUPERFAMILY SWIB/MDM2 domain 304 394 IPR036885 -
Dod01g1764 529 SMART swib_2 310 389 IPR019835 -
Dod01g1764 529 Pfam SWIB/MDM2 domain 313 384 IPR003121 -
Dod01g1764 529 PANTHER SWI/SNF COMPLEX COMPONENT SNF12 HOMOLOG ISOFORM X1 87 526 - -
Dod01g1764 529 MobiDBLite consensus disorder prediction 89 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod01g1764 Dod-Chr1 51422292 51425502 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Dod01g1764 SWIB 1.3e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod01g1764 K11650 - gmx:100776562 868.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod01g1764 01 51422292 51425502 Dod02g2156 02 44670954 44673514 PCT