Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g1419 ATGGCTGTTTCCATGAGAGATTTGGATCCAGCTTTTCAGGGAGCTGGACAAAAGGCTGGACTTGAAATATGGCGCATTGAGAATTTCAAGCCAGTTTCTGTTCCTATGTCCTCCCATGGGAAGTTTTACACTGGGGACTCATATGTGATCTTGAAGACAACTGCTTCAAAAAGTGGTGCCTTGCGTCATGATATCCATTACTGGCTTGGTAAAGACACTAGTCAGGATGAAGCAGGTGTTGCAGCCATCAAAACGATTGAGCTGGATGCAGCTCTTGGAGGACGTGCTGTTCAGTATCGTGAATCACAAGGTCATGAAAGTGAAAAGTTCCTGTCTTATTTTAAACCATGTATAATGCCTCGAGAAGGTGGAGTTGCCTCTGGTTTTAAACATGTTGAGGCTGATGAACATACAACACGGTTGTATGTATGCAAAGGGAAATATGTTGTTCCTTTTGCACGATCAACACTCAGCCATGATGATGTTTTTATTCTGGATACCCAGTCCAAAATCTTCCAATTTAATGGTTCCAATACAAATATTCAAGAAAGGGCTAAAGCATTGGAAGTTGTGCAGTATATAAAGGATACTTTTCATGATGGAAAATGTGAGGTAGCTATTGTTGAGGATGGAAAGTTGATGGCCGATGCCGACGCTGGAGAATTCTGGGGTCTCTTTGGGGGCTTTGCTCCTCTTCCACGGAAAACAGCCAGTGATGATGATAAAACTGTTGATTCTCATCCTCCAAAGCTGCTGTGTGTTGTGAAGGGGCAGGCAGAACCTGTTGAGACCGATTCTTTGACAAGGGAACTACTGGATACTAATAAATGTTATATTCTTGATTGTGGGTTGGAAGTGTTTGTCTGGATGGGAAGAAACACCTCTCTTGATGAAAGAAAAAGTGCAAGTGGAGCTACAGATGCATTAGTCAGTGGCCCTAATCGATTTCAATCCCACATAATTCGTGTAATTGAAGGATTTGAAACAGTAATGTTCAAGTCCAAGTTTGATTCTTGGCCTCAAACAACTAATGTAACTGTATCTGAGGATGGTCGTGGCAGGGTGGCAGCCCTTCTAAAACGTCAAGGAGTGGATGTCAAGGGTCTGTTGAAAGTTGATCCAGTGAAAGAAGAACCTCAACCCCACATTGATTGCACAGGACGTTTGCAGGTTTGGCGGGTGAATGGCCAGGAAAAGGTTCTCCTTCAAGCTTCTGATCAGTCAAAATTTTATAGTGGAGATTGCTATGTCTTTCTCTATTCATATCCTGGAGAAGATAAAGAAGAGCATCTTATAGTAACATGGATTGGAAAGAACAGCGTTGAGGAAGAAAGAGCTTCAGCTATTTCACTGGCAAGTAAAATGGTTGAGTCAATGAAGTTCATTCCTTCCCAGGCTCGAATTTATGAAGGGAGTGAACCAATTCAGTTTTATTCTATCCTCCAAAGCTTTATTGTTTTGAAGGGTGGACTTAGTGGTGGATATAAGAATTACATTAAGGAGAAGGAAATTCCAGATGACACATACGATGAGGATGGTGTTGCACTATTCCGCATCCAGGGCTCTGGACCTGACAGTATGCAAGCTATACAAGTTGAAGCAGTTGCTTCTTCCTTGAATTCCTCATATTGCTGCATACTTCATAATGGGTCCACAGTCTTCACATGGCTTGGAAGCTTTACAAACTCAGATGACCATGAACTAGTTGAGAGGATGTTGGATTTGATAAAGCCGGATTTACAAACCAAACCACAAAAGGAAGGTTCAGAATCTGATGAGTTTTGGGATTTGTTAGGAGGGAAGGTGGAATATCCCAGTCAAAAGATTGTAAGAGATGCTGAAAGTGATCCTCGTCTATTTTCTTGCGACTTATCGAAAGAAAATTTAAAGGTGACAGAAGTATACAACTTTTCCCAGGATGATTTAATGACAGAAGATGTTATGATCTTGGATTGTCACTCAGAAATCTTTGTCTGGGTTGGCCAGCAGATTGCCCCAAAGAGTAGAATGCAATCTCTAACAATTGGTGAGAAATTTCTTGAGCAAGATTTTTTCCTAGAAAAATTATCTCGTGAAGCTCCAATATATGTTGTCATGGAAGGGAGTGAACCACCTTTCTTCACTCGCTTCTTCAAATGGGAGTCTGCAAAATCTGCAATGCTGGGAAACTCATTTCAAAAGAGGCTTACAATACTGAAAAATGGGGGTACTCCACCTCTGGATAGACCCAAACGGAGAACAGCAGTATCTTATGGGGGAAGGTCCAGTAGCGCGCCAGAAAAAGCCCAGCGTTCCCGCAGCGTGTGTTTGGCTCCTGATCGTGCTCGTGTGAGAGGCAGGTCTCCAGCCTTTAATGCGCTAGCAGCTACATTTGAGAGCCCCAAAGATAGAAACCTTTCAACTCCACCCCCTATGGTTAGAAAGCTGTATCCAAAATCTCTGACACCTGATTCAGCAAAAATGGCACCCAAATCTGCAGCTATAGCGGCACTTAGTTCTACTTTTGAATCATCCCGTCCAGCTCGAGAAAACCTTATACCTCGATCAATCAAAGTGAGCCCAGAGATCCGAAAGTCTGATACAAACAATGGGAAGGATTCTATGAGCAGTATACAGGAAGATGTGAAAGAGGGTGAGACCGAAGATGATGAAGGTCTCCCAGTTTACCCATATGAACGCCTTAAAATAGGATCTACAGATCCTGTAGCAGACATTGATGTGACCAGGCGAGAGGCTTATATGTCGGCTGCGGAGTTCAAAGAGAAATTTGGGATGACAAAAGGTGATTTATACAAGTTGCCCAAATGGAAACAGAACAAACTCAAAATGGCCGTTGCGGCCTTGCAGGAAGGAAGTGAACATATAGAAGTGAAAGGGACAGCATCAGTGGTTTTTTAG 2898 0.4268 MAVSMRDLDPAFQGAGQKAGLEIWRIENFKPVSVPMSSHGKFYTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGVAAIKTIELDAALGGRAVQYRESQGHESEKFLSYFKPCIMPREGGVASGFKHVEADEHTTRLYVCKGKYVVPFARSTLSHDDVFILDTQSKIFQFNGSNTNIQERAKALEVVQYIKDTFHDGKCEVAIVEDGKLMADADAGEFWGLFGGFAPLPRKTASDDDKTVDSHPPKLLCVVKGQAEPVETDSLTRELLDTNKCYILDCGLEVFVWMGRNTSLDERKSASGATDALVSGPNRFQSHIIRVIEGFETVMFKSKFDSWPQTTNVTVSEDGRGRVAALLKRQGVDVKGLLKVDPVKEEPQPHIDCTGRLQVWRVNGQEKVLLQASDQSKFYSGDCYVFLYSYPGEDKEEHLIVTWIGKNSVEEERASAISLASKMVESMKFIPSQARIYEGSEPIQFYSILQSFIVLKGGLSGGYKNYIKEKEIPDDTYDEDGVALFRIQGSGPDSMQAIQVEAVASSLNSSYCCILHNGSTVFTWLGSFTNSDDHELVERMLDLIKPDLQTKPQKEGSESDEFWDLLGGKVEYPSQKIVRDAESDPRLFSCDLSKENLKVTEVYNFSQDDLMTEDVMILDCHSEIFVWVGQQIAPKSRMQSLTIGEKFLEQDFFLEKLSREAPIYVVMEGSEPPFFTRFFKWESAKSAMLGNSFQKRLTILKNGGTPPLDRPKRRTAVSYGGRSSSAPEKAQRSRSVCLAPDRARVRGRSPAFNALAATFESPKDRNLSTPPPMVRKLYPKSLTPDSAKMAPKSAAIAALSSTFESSRPARENLIPRSIKVSPEIRKSDTNNGKDSMSSIQEDVKEGETEDDEGLPVYPYERLKIGSTDPVADIDVTRREAYMSAAEFKEKFGMTKGDLYKLPKWKQNKLKMAVAALQEGSEHIEVKGTASVVF 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g1419 965 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
Dere14g1419 965 FunFam Villin-like 1 132 242 - -
Dere14g1419 965 PANTHER VILLIN 7 938 IPR007122 GO:0051015
Dere14g1419 965 FunFam Villin-4 380 514 - -
Dere14g1419 965 Gene3D Severin 375 516 IPR029006 -
Dere14g1419 965 MobiDBLite consensus disorder prediction 733 766 - -
Dere14g1419 965 MobiDBLite consensus disorder prediction 855 885 - -
Dere14g1419 965 FunFam Gelsolin 6 131 - -
Dere14g1419 965 CDD gelsolin_S6_like 616 713 - -
Dere14g1419 965 SUPERFAMILY Actin depolymerizing proteins 590 712 - -
Dere14g1419 965 CDD gelsolin_S1_like 12 124 - -
Dere14g1419 965 ProSiteProfiles Headpiece (HP) domain profile. 883 948 IPR003128 GO:0003779|GO:0007010
Dere14g1419 965 SUPERFAMILY Actin depolymerizing proteins 219 345 - -
Dere14g1419 965 FunFam Gelsolin 515 607 - -
Dere14g1419 965 CDD gelsolin_S3_like 249 338 - -
Dere14g1419 965 SUPERFAMILY Actin depolymerizing proteins 506 607 - -
Dere14g1419 965 SMART VILL_6 249 339 IPR007122 GO:0051015
Dere14g1419 965 SMART VILL_6 514 601 IPR007122 GO:0051015
Dere14g1419 965 SMART VILL_6 387 484 IPR007122 GO:0051015
Dere14g1419 965 SMART VILL_6 19 117 IPR007122 GO:0051015
Dere14g1419 965 SMART VILL_6 137 229 IPR007122 GO:0051015
Dere14g1419 965 SMART VILL_6 617 714 IPR007122 GO:0051015
Dere14g1419 965 SUPERFAMILY VHP, Villin headpiece domain 874 945 IPR036886 GO:0003779|GO:0007010
Dere14g1419 965 SUPERFAMILY Actin depolymerizing proteins 138 234 - -
Dere14g1419 965 Pfam Gelsolin repeat 405 476 IPR007123 -
Dere14g1419 965 Pfam Gelsolin repeat 29 111 IPR007123 -
Dere14g1419 965 Pfam Gelsolin repeat 149 212 IPR007123 -
Dere14g1419 965 Pfam Gelsolin repeat 632 707 IPR007123 -
Dere14g1419 965 Pfam Gelsolin repeat 261 302 IPR007123 -
Dere14g1419 965 Gene3D Severin 133 241 IPR029006 -
Dere14g1419 965 FunFam Villin-4 243 349 - -
Dere14g1419 965 Pfam Villin headpiece domain 913 945 IPR003128 GO:0003779|GO:0007010
Dere14g1419 965 Gene3D Villin headpiece domain 886 946 IPR036886 GO:0003779|GO:0007010
Dere14g1419 965 Gene3D Severin 517 608 IPR029006 -
Dere14g1419 965 FunFam Villin-like 1 608 729 - -
Dere14g1419 965 Gene3D Severin 7 132 IPR029006 -
Dere14g1419 965 SUPERFAMILY Actin depolymerizing proteins 377 523 - -
Dere14g1419 965 CDD gelsolin_S4_like 383 480 - -
Dere14g1419 965 CDD gelsolin_S5_like 512 603 - -
Dere14g1419 965 SMART VHP_1 913 948 IPR003128 GO:0003779|GO:0007010
Dere14g1419 965 Gene3D Severin 609 728 IPR029006 -
Dere14g1419 965 Gene3D Severin 242 351 IPR029006 -
Dere14g1419 965 PRINTS Gelsolin family signature 639 661 IPR007122 GO:0051015
Dere14g1419 965 PRINTS Gelsolin family signature 318 339 IPR007122 GO:0051015
Dere14g1419 965 PRINTS Gelsolin family signature 406 422 IPR007122 GO:0051015
Dere14g1419 965 PRINTS Gelsolin family signature 431 449 IPR007122 GO:0051015
Dere14g1419 965 PRINTS Gelsolin family signature 587 606 IPR007122 GO:0051015
Dere14g1419 965 PRINTS Gelsolin family signature 527 547 IPR007122 GO:0051015
Dere14g1419 965 PRINTS Gelsolin family signature 464 484 IPR007122 GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g1419 Dere-ChrDere14 14598720 14607567 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g1419 14 14598720 14607567 Dere03g1482 03 24494752 24510080 CCT