Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g1482 ATGGCTGTTTCCATGAGAGACTTGGATCCAGCTTTCCAGGGAGCTGGACAAAAGGCTGGACTAGAAATATGGCGAATTGAGAATTTTAATCCAGTTGCCGTCCCAAAGTCTTCTTATGGGAAGTTTTTCACAGGGGACTCCTACGTGATCTTGAAGACAACTGCTTCAAAGAGTGGTGTCCTGCGGCATGATATCCATTACTGGCTTGGTAAAGACACCAGTCAGGATGAAGCTGGTGCTGCTGCCATCAAGACAGTTGAGCTGGATGCAGCTCTTGGAGGTCGTGCTGTTCAATATCGTGAAATGCAGGGTCATGAAACTGAAAAGTTCCTGTCTTACTTCAAACCATGTATTATACCTCAGGAAGGTGGGGTTGCCTCTGGTTTTAAGCATGCTGAGGCTGAAGAATATGAGACACGTATGTTTGTATGCAAAGGAAAACACGTTGTACATGTGAAAGAGGTCCCTTTTGCCCGATCTTCACTAAACCATGACGATATATTTATTCTGGATACAAAGTCCAAAATCTTCCAATTTAATGGTTCAAATTCATCAATACAAGAAAGGGCTAAAGCATTGGAAGTTGTACAATACATTAAAGATACATACCATGATGGGAAATGTGAGGTAGCTGCTATTGAGGATGGAAAGTTGATGGCTGATTCTGAAACTGGAGAATTCTGGAGTTTCTTTGGAGGCTTTGCTCCTCTTCCACGAAAAACAGCCAGTGATGAAGATCAGCTTGTTGATTCTCATCCGCCGAAGCTGTTTTGTGTTGAAAAGGGGATAGCTGAACCTGTTGAGAATGATTCTCTGACAAGGGAGTTACTGGACACAACTAAATGCTATATTCTTGATTGTGGGCTGGAATTGTTTGTCTGGATGGGAAGAAATACCTCTCTTGATGAAAGAAAAAGTGCAAGTGGAGCTGCAGATGAGTTAGTCAGTGGCTCTGATAGACCGAAATCCCATATAATTCGTGTAATTGAAGGATTTGAAACAGTGATGTTCAGGTCTAAGTTTGATTCTTGGCCTCAGACAACTGAAGTAACTGTGTCTGAAGATGGTCGTGGAAAAGTAGCAGCACTTCTAAAACGCCAGGGAGTGAATGTCAAGGGTCTGCTGAAAGCTGATCCAGTAAAAGAAGAACCTCAACCCTACATCGATTGCACAGGAAATTTGCAGGTTTGGCGTGTAAATGGCCAGGAAAAGATTCTCCTTCCTACATCTGATCAGTCAAAATTTTATAGTGGAGATTGCTACATCTTTCAGTATTCATATCCTGGAGAAGATAAGGAAGAGTTTCTTATAGGAACATGGATTGGAAAGACTAGTGTTGAGGAAGAAAGAGCTTCAGCTATTTCACTAGCAAGCAAAATGGTTGAGTCAATGAAGTTTCTTCCTTCCCAGACTCGTATTTATGAAGGGAATGAGCCAATTCAATTTTATACAATTCTCCAAAGCTTAATTGTATTTAAGGGTGGACTTAGTGATGGATACAAGAATTACATTGCGGAAAAGGAGATCCCTGATCAGACATACAATGAGGATGGTGTTGCACTATTTCGCATCCAGGGCTCTGGGCCAGACAATATGCAAGCTATACAAGTTGAACCAGTTGCTTCTTCCTTGAATTCCTCTTACTGCTACATACTTCATAACGGGTCCACTGTCTTTACGTGGACTGGAAGCCTTACAACCTCAGATGTCCAGGAACTTGTTGAGAGGATGTTGGACTTGATAAAGCCAAATTTACAATCTAAGCCACAAAAGGAAGGGTCAGAATCTGAACAGTTTTGGGATTTGCTAGGAGGAAAATCTGAATATCCTAGCCCAAAGATTGTAAGGGCTGCAGAAAGTGATCCTCACCTATTTTCTTGCAACTTCTCAAAAGGAAATTTGAAGGTGACAGAGATATTCAACTTTTCCCAGGATGATTTGATGACAGAAGATATTTTCATCTTGGATTGTCACTCTGAAATCTTTGTCTGGGTTGGCCAGCAGGTTGACCCCAAGAGTAGAATGCAGGCTCTAACAATTGGTGAGAAATTTCTTGAGCATGATGTTCTTCTAGAAAAAATATCTCATGAAACTCCTATATACATTGTCATGGAAGGGAGTGAGCCACCTTTCTTCACTCGCTTCTTCACATGGGATTCTGCAAAATCTGAAATGCTGGGAAACTCGTTTCAAAGGAAGCTCACAATAGTGAAAAATGGGGGAACTCCAACTGTGGATAAACCCAAACGAAGAACACCAGCATCCTATGGGGGAAGATCTAGCAGCGTACCAGATAAATCCCAGCGTTCCCGCAGCATGTCCTTTAGTCCAGATCGTGTGCGCGTGCGGGGCAGGTCTCCAGCCTTCAATGCCTTGGCAGCTGCATTTGAGAACCCTAATGCTAGGAACCTTTCAACTCCACCTCCTGTGGGGAGGAAATTGTATCCCAAATCCGTGACCCCAGATTCAGCAAAATTGGCACCCAAATCATCGGCTATAGCAGCACTTAGTTCTAGCTTTGAGCAACCACCTTCAGCACGAGATAGTATTATACCACGGTCAATTAAAGTGAGTCAGAGTCCGGAGGCAGTTAAACCAAAGCCTGAGACAAACGATAAGGAGAATTCTATGACCAGCAGAATAGAATCTCTTACCATAAAGGAAGATGTGAAAGAAGATGAAGCTGAAGATGAGGAAGGTCTTCCAATTTATCCATATGAACGCCTCAAAATAACATCTACAGATCCTGTAACAGACATTGATGTGACTAAGCGAGAGACTTATCTGTCATCTGCGGAGTTCAAAGAGAAATTTGGAATGACAAAGGATGCCTTTTACAACTCCCTGAACTTTAGAGTGGAACTGAACATATCAAAGTAA 2880 0.4233 MAVSMRDLDPAFQGAGQKAGLEIWRIENFNPVAVPKSSYGKFFTGDSYVILKTTASKSGVLRHDIHYWLGKDTSQDEAGAAAIKTVELDAALGGRAVQYREMQGHETEKFLSYFKPCIIPQEGGVASGFKHAEAEEYETRMFVCKGKHVVHVKEVPFARSSLNHDDIFILDTKSKIFQFNGSNSSIQERAKALEVVQYIKDTYHDGKCEVAAIEDGKLMADSETGEFWSFFGGFAPLPRKTASDEDQLVDSHPPKLFCVEKGIAEPVENDSLTRELLDTTKCYILDCGLELFVWMGRNTSLDERKSASGAADELVSGSDRPKSHIIRVIEGFETVMFRSKFDSWPQTTEVTVSEDGRGKVAALLKRQGVNVKGLLKADPVKEEPQPYIDCTGNLQVWRVNGQEKILLPTSDQSKFYSGDCYIFQYSYPGEDKEEFLIGTWIGKTSVEEERASAISLASKMVESMKFLPSQTRIYEGNEPIQFYTILQSLIVFKGGLSDGYKNYIAEKEIPDQTYNEDGVALFRIQGSGPDNMQAIQVEPVASSLNSSYCYILHNGSTVFTWTGSLTTSDVQELVERMLDLIKPNLQSKPQKEGSESEQFWDLLGGKSEYPSPKIVRAAESDPHLFSCNFSKGNLKVTEIFNFSQDDLMTEDIFILDCHSEIFVWVGQQVDPKSRMQALTIGEKFLEHDVLLEKISHETPIYIVMEGSEPPFFTRFFTWDSAKSEMLGNSFQRKLTIVKNGGTPTVDKPKRRTPASYGGRSSSVPDKSQRSRSMSFSPDRVRVRGRSPAFNALAAAFENPNARNLSTPPPVGRKLYPKSVTPDSAKLAPKSSAIAALSSSFEQPPSARDSIIPRSIKVSQSPEAVKPKPETNDKENSMTSRIESLTIKEDVKEDEAEDEEGLPIYPYERLKITSTDPVTDIDVTKRETYLSSAEFKEKFGMTKDAFYNSLNFRVELNISK 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g1482 959 Gene3D Severin 380 521 IPR029006 -
Dere03g1482 959 SMART VILL_6 392 489 IPR007122 GO:0051015
Dere03g1482 959 SMART VILL_6 254 344 IPR007122 GO:0051015
Dere03g1482 959 SMART VILL_6 19 117 IPR007122 GO:0051015
Dere03g1482 959 SMART VILL_6 519 606 IPR007122 GO:0051015
Dere03g1482 959 SMART VILL_6 137 234 IPR007122 GO:0051015
Dere03g1482 959 SMART VILL_6 622 719 IPR007122 GO:0051015
Dere03g1482 959 SUPERFAMILY Actin depolymerizing proteins 511 612 - -
Dere03g1482 959 SUPERFAMILY Actin depolymerizing proteins 595 716 - -
Dere03g1482 959 CDD gelsolin_S2_like 138 232 - -
Dere03g1482 959 FunFam Gelsolin 520 612 - -
Dere03g1482 959 CDD gelsolin_S5_like 517 608 - -
Dere03g1482 959 Gene3D Severin 7 132 IPR029006 -
Dere03g1482 959 CDD gelsolin_S3_like 254 343 - -
Dere03g1482 959 Gene3D Severin 522 612 IPR029006 -
Dere03g1482 959 FunFam Gelsolin 6 131 - -
Dere03g1482 959 CDD gelsolin_S1_like 12 124 - -
Dere03g1482 959 FunFam Villin-like 1 613 734 - -
Dere03g1482 959 FunFam Villin-4 249 354 - -
Dere03g1482 959 Gene3D Severin 133 245 IPR029006 -
Dere03g1482 959 Gene3D Severin 246 357 IPR029006 -
Dere03g1482 959 PANTHER VILLIN 7 947 IPR007122 GO:0051015
Dere03g1482 959 CDD gelsolin_S6_like 621 720 - -
Dere03g1482 959 SUPERFAMILY Actin depolymerizing proteins 129 244 - -
Dere03g1482 959 SUPERFAMILY VHP, Villin headpiece domain 889 947 IPR036886 GO:0003779|GO:0007010
Dere03g1482 959 MobiDBLite consensus disorder prediction 755 775 - -
Dere03g1482 959 FunFam Villin-4 385 519 - -
Dere03g1482 959 SUPERFAMILY C-terminal, gelsolin-like domain of Sec23/24 254 427 IPR036180 -
Dere03g1482 959 SUPERFAMILY Actin depolymerizing proteins 382 528 - -
Dere03g1482 959 MobiDBLite consensus disorder prediction 737 780 - -
Dere03g1482 959 PRINTS Gelsolin family signature 644 666 IPR007122 GO:0051015
Dere03g1482 959 PRINTS Gelsolin family signature 436 454 IPR007122 GO:0051015
Dere03g1482 959 PRINTS Gelsolin family signature 323 344 IPR007122 GO:0051015
Dere03g1482 959 PRINTS Gelsolin family signature 673 692 IPR007122 GO:0051015
Dere03g1482 959 PRINTS Gelsolin family signature 532 552 IPR007122 GO:0051015
Dere03g1482 959 PRINTS Gelsolin family signature 411 427 IPR007122 GO:0051015
Dere03g1482 959 PRINTS Gelsolin family signature 469 489 IPR007122 GO:0051015
Dere03g1482 959 PRINTS Gelsolin family signature 592 611 IPR007122 GO:0051015
Dere03g1482 959 Pfam Gelsolin repeat 29 111 IPR007123 -
Dere03g1482 959 Pfam Gelsolin repeat 638 712 IPR007123 -
Dere03g1482 959 Pfam Gelsolin repeat 267 337 IPR007123 -
Dere03g1482 959 Pfam Gelsolin repeat 150 216 IPR007123 -
Dere03g1482 959 Pfam Gelsolin repeat 409 482 IPR007123 -
Dere03g1482 959 Gene3D Villin headpiece domain 901 952 IPR036886 GO:0003779|GO:0007010
Dere03g1482 959 MobiDBLite consensus disorder prediction 858 878 - -
Dere03g1482 959 CDD gelsolin_S4_like 386 482 - -
Dere03g1482 959 Gene3D Severin 615 734 IPR029006 -
Dere03g1482 959 FunFam Villin-like 1 132 247 - -
Dere03g1482 959 ProSiteProfiles Headpiece (HP) domain profile. 898 959 IPR003128 GO:0003779|GO:0007010
Dere03g1482 959 SUPERFAMILY Actin depolymerizing proteins 9 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g1482 Dere-ChrDere03 24494752 24510080 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g1482 03 24494752 24510080 Dere14g0133 14 1446225 1448572 CCT
Dere14g1419 14 14598720 14607567 Dere03g1482 03 24494752 24510080 CCT
Dere03g1482 03 24494752 24510080 Dere03g1482 03 24494752 24510080 ECH