Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0630 ATGCCAGTCACATCTACTTGCAACTTTGGCCTCTGGTTAATGGCAATAGAAAAGTGGTTAAGTGGTTGTAAATAATCTCTGGACCGTGAAATCGAATATTGCTGCTTTAGCCTGACTATCAAGCTCCTCTGCTGCACCAGGCCGCACAGCTCCCTCACAATTCACAAACTCAAACTAGTGTCTCTCTCGTCTGTGAGCGCCATGGATCCAAACCCTGGAAGCTTTCCTCTTCTCTCCTACGTCATGAGTCGACTCCCTTCGCTGGGGCCTAGACCTGCCACCCACGTTGAATTTGACATCGAACAACCCCACCTTTCGTCGCCGCCGCCGCACCATGTTCATTCTTCTTCTTCGGGCGAACCTGAAATTGTGGGAAAAATGCCTCACCTCACTGATCCGAAACTCTTAGAAGCCATGACCCGCGCAATCTCCGACGTCGCCCAGACCCGATCTGTGCTTAAGCTAATCGGCGAGCGACCCGACCATGAAGCCGTCGATGATGCAAAGGCCAAACTTGCCGATATAGAAGCCCAATTGTCCAAGCAACTGGAAGAGATTGTGCTCTCACCGAGGCCTGAGAATATCGACATCCTTCAATGGCGAGCTCATCAGGCCGAAAGAGAGAAGGAGTGCCGGGAATTAGCGGAGAAAGAGAAGCGGGCGTACAGGTCGATGATACAGTTGGATGAGATGCACGGTGCTTATGCGAAACTGCTGAAAGATGCTGAGAAGAGGCTGGTGGAAATTTACGAGTCTGCCGGGGAGGGAGCAGAACATGCGGAGGAACCCAAGCCTGTTGGCGAGGAGATTAATGAAGAGGTTGTGGGGATACTACAGGAGGTATATGGAAAGGGGATGGAGCGAGTGAATCTTTCAGGGCGACGGTTGAGGTTGCTGCCTGAGGCCTTTGGGCGAATTCCTGGCTTGGTTGTGCTTGATCTTTCAAACAATCAGCTGGAGATGATTCCTGACTCAATAGCTGGATTGCAAAGTCTTGAGGAGCTTAATGTCTCTTCAAATCTTTTGGAGTGTCTTCCAGATTCAATTGGCTTGTTACAAAAATTGAAATTTCTGAATGTCTCTGGGAACAAGCTGAATGCTCTTCCTGATTCCATCTGTCATTGCAGGTCATTGGTGGAGCTAGACGCAAGCTTCAATGGTCTGACATATTTGCCAACAAACATTGGACATGAACTAGTGAACTTACAGAAGCTGTCCATTCAATTGAACAAGATACGGTCTCTTCCCTCATCTGTTTGTGAATTGAGGTCCTTGCGGTATCTAGATGCTCATTTTAATGAGCTTCATGGGCTTCCTATTGCAATTGGGAACTTGACTAATCTTGAAGTTCTCAACCTGAGCAGTAATTTCAGTGACCTTAGAGAACTTCCTGAGACATTTGGTGATCTGACTAACCTCAGGGAATTGGATCTCAGTAACAATCAGATTCATGCACTTCCTGATACATTTGGTCGCCTTGACAATTTGGTCAAGCTCAACTTGGAGCAGAACCCTCTGGAATTGCCCCCAATGGAAATTGTAAATGAAGGGGTTGAAGCCGTGAAAACTTTTATGGCTAAGAGGTGGGTTGATATATTGGTAGAGGAAGAAAGGAAAAGCATGCGTGAAATGCAAGAACAAGCACAGGCTGGCTGGTTAACCCGAAGCACCTCCTGGTTGAAGAATTACGTATATGGTGTTTCTGGAAATGTTACTGAGTATTTGGGGTCTGCCATAGGATCTCCTAGGACTCCCAAAGATCCTTATCTTGATCAGCAGCTTTGA 1785 0.4734 MPVTSTCNFGLWLMAIEKWLSGCKXSLDREIEYCCFSLTIKLLCCTRPHSSLTIHKLKLVSLSSVSAMDPNPGSFPLLSYVMSRLPSLGPRPATHVEFDIEQPHLSSPPPHHVHSSSSGEPEIVGKMPHLTDPKLLEAMTRAISDVAQTRSVLKLIGERPDHEAVDDAKAKLADIEAQLSKQLEEIVLSPRPENIDILQWRAHQAEREKECRELAEKEKRAYRSMIQLDEMHGAYAKLLKDAEKRLVEIYESAGEGAEHAEEPKPVGEEINEEVVGILQEVYGKGMERVNLSGRRLRLLPEAFGRIPGLVVLDLSNNQLEMIPDSIAGLQSLEELNVSSNLLECLPDSIGLLQKLKFLNVSGNKLNALPDSICHCRSLVELDASFNGLTYLPTNIGHELVNLQKLSIQLNKIRSLPSSVCELRSLRYLDAHFNELHGLPIAIGNLTNLEVLNLSSNFSDLRELPETFGDLTNLRELDLSNNQIHALPDTFGRLDNLVKLNLEQNPLELPPMEIVNEGVEAVKTFMAKRWVDILVEEERKSMREMQEQAQAGWLTRSTSWLKNYVYGVSGNVTEYLGSAIGSPRTPKDPYLDQQL 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0630 594 PRINTS Leucine-rich repeat signature 309 322 - -
Dere14g0630 594 PRINTS Leucine-rich repeat signature 470 483 - -
Dere14g0630 594 ProSiteProfiles Leucine-rich repeat profile. 308 330 IPR001611 GO:0005515
Dere14g0630 594 ProSiteProfiles Leucine-rich repeat profile. 331 352 IPR001611 GO:0005515
Dere14g0630 594 FunFam Plant intracellular Ras-group-related LRR protein 9 207 390 - -
Dere14g0630 594 FunFam Plant intracellular Ras-group-related LRR protein 2 394 567 - -
Dere14g0630 594 SMART LRR_bac_2 352 371 - -
Dere14g0630 594 SMART LRR_bac_2 445 466 - -
Dere14g0630 594 SMART LRR_bac_2 375 394 - -
Dere14g0630 594 SMART LRR_bac_2 422 441 - -
Dere14g0630 594 SMART LRR_bac_2 399 418 - -
Dere14g0630 594 SMART LRR_bac_2 306 325 - -
Dere14g0630 594 SMART LRR_bac_2 329 348 - -
Dere14g0630 594 SMART LRR_bac_2 470 489 - -
Dere14g0630 594 Gene3D Ribonuclease Inhibitor 410 526 IPR032675 -
Dere14g0630 594 ProSiteProfiles Leucine-rich repeat profile. 472 493 IPR001611 GO:0005515
Dere14g0630 594 SUPERFAMILY L domain-like 284 511 - -
Dere14g0630 594 PANTHER - 287 396 - -
Dere14g0630 594 Gene3D Ribonuclease Inhibitor 223 407 IPR032675 -
Dere14g0630 594 Pfam Leucine rich repeat 447 506 IPR001611 GO:0005515
Dere14g0630 594 Pfam Leucine rich repeat 298 342 IPR001611 GO:0005515
Dere14g0630 594 ProSiteProfiles Leucine-rich repeat profile. 401 422 IPR001611 GO:0005515
Dere14g0630 594 MobiDBLite consensus disorder prediction 96 127 - -
Dere14g0630 594 Coils Coil 165 185 - -
Dere14g0630 594 SMART LRR_typ_2 376 398 IPR003591 -
Dere14g0630 594 SMART LRR_typ_2 329 351 IPR003591 -
Dere14g0630 594 SMART LRR_typ_2 306 328 IPR003591 -
Dere14g0630 594 SMART LRR_typ_2 352 375 IPR003591 -
Dere14g0630 594 SMART LRR_typ_2 445 469 IPR003591 -
Dere14g0630 594 SMART LRR_typ_2 399 422 IPR003591 -
Dere14g0630 594 SMART LRR_typ_2 470 493 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0630 Dere-ChrDere14 6656182 6660796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0630 288 530 Receptor kinase-like Gene Family AT5G07180 31.641 4.34e-13 70.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0708 03 11390437 11393371 Dere14g0630 14 6656182 6660796 CCT
Dere14g0630 14 6656182 6660796 Dere14g0630 14 6656182 6660796 ECH