Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0617 ATGGCCAAGCTTGCCACTATGTTCTCTGCGCGGCACTTGTTGGTGTTGTCTCTGGCGGTAAACATGAGTTTGGTCCTCAGAATAGCTTTTGTGAGTGAAGAAGTCTCTCGTCAGAAGAAGACGAAGGTAGAGGCTATGCCCTCCTCCTCTTCCACATATCATCCACAACACAAGGACAGAGTCATTAATCTTGACCATGGAGACCCGACCATGTATGAAAGATATTGGCGAGAAATGGGGGAGAAGATGACGATTACAATTCCGGGGTGGCAATCGTTGAGCTACATATCGGATTGGAACAATGTTTGCTGGTTTCTAGAGGCAGAGTTTGCGAAGGAGGTGGTGAGGCTGCACAATGTGGTGGGAAATGCGGCTACAGAAGGCACTCATATTGTTGTAGGGACAGGTTCCTCTCAGCTCATAGTGGCTGCTCTTTATGCTCTTTCTCCACGTGATGCATCCGAACCCATCAGTGTCGTCTCTGCCACACCTTATTACTCGTCGTACCCAGAAATGACTGATTACCAGAAATCAGGGCTTTACAAATGGGGTGGTAATGCAGAGAGTTTTGACAAGGAAGGTCCCTACATAGAGCTAGTTACGTCTCCCAACAACCCTGATGGCTATGAAAGGCGACCCGTGGTCAACAGTAGCCAGGGCCTGTTGGTTCATGACCTGGCCTATTATTGGCCACAATACACTACCATTTCGTCCCCTGTAAATCACGACTTAACCCTCTTCACTGTTTCCAAATGCACTGGCCATGCCGGAATTCGCATAGGGTGGGCTCTTGTGAAAGACAAAGAGGTAGCAAAGAGGATGACGAAGTTTATAGAGTTGAATTCACTAGGTGTGTCAAAGGACTCGCAGCTGAGGGCTGCTAAGATTTTAAGGGCAGTGTCTGAGAGCTGCGAAGAACAAGAAGGTGAATCATTCTTCGAGTTCAACTACAATGTAATGGCCCTGAGGTGGAAGCAACTGAGAGCAGTAATTGCGCTTAGTGGAGTGTTCAGTTTGCCCAACTTTTCTCCTGCATTCTGCACTTTTTCCCGTCGAGTGATCGAGCCTCAACCTGCCTTTGCGTGGTTAAAGTGTGAGGGGGATATACAGGACTGTGCAATTTTCCTGAGACAACACAAAATACTAGGTCGAAGTGGGAAGCAATTTGGGGCTAGCCCGAAATACGTAAGAATAAGCATGCTGGACACGGATGAAACTTTCATCCTGCTTTTAGATAGGTTGTCCGCCATAAAGTCAGAGTATGTATAA 1269 0.4736 MAKLATMFSARHLLVLSLAVNMSLVLRIAFVSEEVSRQKKTKVEAMPSSSSTYHPQHKDRVINLDHGDPTMYERYWREMGEKMTITIPGWQSLSYISDWNNVCWFLEAEFAKEVVRLHNVVGNAATEGTHIVVGTGSSQLIVAALYALSPRDASEPISVVSATPYYSSYPEMTDYQKSGLYKWGGNAESFDKEGPYIELVTSPNNPDGYERRPVVNSSQGLLVHDLAYYWPQYTTISSPVNHDLTLFTVSKCTGHAGIRIGWALVKDKEVAKRMTKFIELNSLGVSKDSQLRAAKILRAVSESCEEQEGESFFEFNYNVMALRWKQLRAVIALSGVFSLPNFSPAFCTFSRRVIEPQPAFAWLKCEGDIQDCAIFLRQHKILGRSGKQFGASPKYVRISMLDTDETFILLLDRLSAIKSEYV 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0617 422 Gene3D Aspartate Aminotransferase, domain 1 311 418 IPR015422 GO:0003824
Dere14g0617 422 Gene3D - 106 310 IPR015421 GO:0003824
Dere14g0617 422 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 48 416 - -
Dere14g0617 422 SUPERFAMILY PLP-dependent transferases 49 417 IPR015424 -
Dere14g0617 422 CDD AAT_like 109 414 - -
Dere14g0617 422 Pfam Allinase 62 417 IPR006948 GO:0016846
Dere14g0617 422 Gene3D - 28 102 IPR037029 GO:0016846
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0617 Dere-ChrDere14 6491422 6494860 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0729 03 11658758 11663324 Dere14g0617 14 6491422 6494860 CCT
Dere14g0617 14 6491422 6494860 Dere14g0617 14 6491422 6494860 ECH