Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0586 ATGCTGGGGCTCGTTTCGAAGAGAATTTTGGGTGCAGCGGCACGGGAGGTGCCGTCACCGGCGCTCCTGGTTCTGCCCCGATTCTACCACGAGAGGGTTGTTGATCACTACAACAATCCACGGAATGTTGGATCCTTCGACAAGAATGACCCCGCCGTCGGTACGGGCTTGGTTGGGGCACCCGCATGTGGGGATGTCATGAAACTTCAGATTAAGGTCGATGAAAAGACCGGAAAGATTGTTGATGCTCGTTTCAAGACCTTCGGCTGTGGTTCGGCCATTGCCTCTTCGTCTGTGGCTACTGAATGGGTAAAGGGAAAACAAATGGAGGAAGTTTTGTCCATAAAAAACACGGAAATCGCAAAGCATCTATCCCTTCCTCCTGTTAAGCTTCATTGCAGTATGCTTGCTGAGGATGCCATTAAAGCAGCTGTTAAAGACTACGAAGCTAAGCGTGCCAAGGCAGCTGCTAGTGAGGAAGGCACATCTGGAGAGAAGGCTGCCACTGCTTGA 513 0.5127 MLGLVSKRILGAAAREVPSPALLVLPRFYHERVVDHYNNPRNVGSFDKNDPAVGTGLVGAPACGDVMKLQIKVDEKTGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLSIKNTEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYEAKRAKAAASEEGTSGEKAATA 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0586 170 Pfam NifU-like N terminal domain 29 154 IPR002871 GO:0005506|GO:0016226|GO:0051536
Dere14g0586 170 SUPERFAMILY SufE/NifU 28 153 - -
Dere14g0586 170 Gene3D - 28 169 - -
Dere14g0586 170 FunFam Iron-sulfur cluster assembly protein 29 168 - -
Dere14g0586 170 CDD IscU_like 29 144 IPR002871 GO:0005506|GO:0016226|GO:0051536
Dere14g0586 170 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 5 160 IPR002871 GO:0005506|GO:0016226|GO:0051536
Dere14g0586 170 NCBIfam Fe-S cluster assembly scaffold IscU 29 152 IPR011339 GO:0005506|GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0586 Dere-ChrDere14 6160091 6163445 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0778 03 12277303 12279391 Dere14g0586 14 6160091 6163445 CCT
Dere14g0586 14 6160091 6163445 Dere14g0586 14 6160091 6163445 ECH