Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0778 ATGCTGAGGCTAGCTTCCAAGAGAGTGGTCGGAATCGCGTCACGGGAGGTGACGTCGCGGTCGCCGGCGTCCCGGCTTCTGCCTCGATTTTACCACGAGAGGGTTGTTGATCACTACAACAACCCCCGGAATGTCGGATCCTTCGACAAGAATGATCCCAACGTGGGTACGGGGTTGGTTGGGGCACCTGCTTGTGGGGATGTCATGAAACTGCAGATAAAGGTTGATGAGGAGACCGGTAAGATTGTCGATGCTCGCTTCAAGACCTTCGGCTGTGGGTCGGCCATTGCCTCTTCCTCTGTAGCTACGGAATGGGTGAAGGGAAAGCAAATGGAGGAAGTTCTTTCCATTAGAAACTCTGAAATTGCAAAGCACCTTTCGCTCCCGCCAGTTAAGCTTCACTGCAGTATGCTTGCTGAGGATGCTATTAAAGCAGCTGTTAAAGACTATGAAACTAGGCGTGCCAAGCAAAATGGTAGTGCAGTTGCCGCTTCTGGAGAGAAGGCTACCCCTACTTGA 519 0.5222 MLRLASKRVVGIASREVTSRSPASRLLPRFYHERVVDHYNNPRNVGSFDKNDPNVGTGLVGAPACGDVMKLQIKVDEETGKIVDARFKTFGCGSAIASSSVATEWVKGKQMEEVLSIRNSEIAKHLSLPPVKLHCSMLAEDAIKAAVKDYETRRAKQNGSAVAASGEKATPT 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0778 172 SUPERFAMILY SufE/NifU 30 155 - -
Dere03g0778 172 FunFam Iron-sulfur cluster assembly protein 31 170 - -
Dere03g0778 172 PANTHER IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG 13 161 IPR002871 GO:0005506|GO:0016226|GO:0051536
Dere03g0778 172 Gene3D - 30 170 - -
Dere03g0778 172 CDD IscU_like 31 146 IPR002871 GO:0005506|GO:0016226|GO:0051536
Dere03g0778 172 NCBIfam Fe-S cluster assembly scaffold IscU 31 154 IPR011339 GO:0005506|GO:0016226|GO:0051536
Dere03g0778 172 Pfam NifU-like N terminal domain 31 156 IPR002871 GO:0005506|GO:0016226|GO:0051536
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0778 Dere-ChrDere03 12277303 12279391 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0778 03 12277303 12279391 Dere14g0586 14 6160091 6163445 CCT