Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0583 ATGGCTGACTTAGTAGAAGGTAAAGTTCTTGGAATTGACGGTATAAAGGACCCGGAGACTGAGGAGAGGAGCAAACACGTAAAGAGCAGTGTGATTAAGGAGGAGGGGATGGCACCTACCTCCGGCAATTCAATTCACCGGTCGAGTTCAAGGCCGCAGCTCGATGTCAGCAAAGCTGAAATACAAGGAAATGTGGAGGAGAGGGATCCCACAATTTTATTGCCCAACCAATCAGATGATATATCTCACCTGGCTCTTGACATTGGAGGATCTCTGATAAAGTTGGTGTACTTTTCAAGACATGAAGATCGATCAGTTAATGATAAAAGAAAGAGAAGTATGAAGGAGCGACTGGGAATTTCTAATGGTAACAGAAGAAGCTATCCTATTCTAGGCGGCAGGCTTCATTTTGTGAAGTTTGAGACAAGCAAGATTAACGAGTGCTTAGACTTCATTTATTCAAAGCAGCTTCACTGTGGTGGGTTGGAATCACATTACTCTGACACTGTGGCTGACCGAAATTCCATAATTAAGGCTACTGGTGGTGGATCCTACAAGTTTGCTGACCTTTTTAAGGAAAGACTTGGGGTTAGTCTTGACAAAGAAGATGAAATGGATTGTCTTGTAGCAGGAGCAAATTTTTTGCTTAAGGCAATTCGTCATGAAGCTTTCACGCACATAGAGGGCCAGAAAGATTTTGTTCAAATTGACCCAAATGATTTGTTTCCTTATCTTCTAGTTAATATTGGATCTGGTGTTAGTATGATCAAGGTTGATGGGGATGGGAAATTTGAGAGGGTAAGTGGTACAAATGTTGGTGGTGGTACTTATTGGGGTTTGGGAAGACTGTTAACTAAGTGCAAGAGTTTCGATGAGTTGCTTGAACTCAGTCAGAAAGGGGATAATAGAACCATTGATATGCTTGTTGGGGACATATATGGTGGAATGGACTACTCTAAGATTGGCCTGTCAGCTTCAACCATTGCTTCAAGTTTTGGCAAGACTATATCAGAAAAAAAGGAGCTTCAAGGCTATAGACCTGAAGATATTTCACTCTCTCTTTTACGGATGATTTCATACAACATTGGCCAGATATCTTACTTGAATGCGTTGCGATTTGGGTTGAAGCGTATCTTTTTCGGAGGATTTTTTATAAGGGGTCATGCCTATACCATGGATACAATTTCTTTTGCAGTTCATTTTTGGTCTAAAGGGGCAGCACAAGCCATGTTCTTGCGACATGAAGGATTTCTGGGGGCTTTAGGTGCATTTATGAGCTATGAAAAGCATGGTTTAGATGACCTCATGGTGCATCAGTTAGTTGAAAGGTTCCCAATGGGTGCTCCATATACCGGTGGCAAGATTCACGGCCCACCACTTGGAGATTTGAATGAAAAGATTTCGTGGATGGAGAAGTTTTTGCAGAAGGGAACAGAGATAACTGCACCTGTGCCAATGACTCCAGCCAGAACTACTGGACTTGGGGGTTTTGAAGTTCCTTTGTCAAAAGGAAGTTCTCTGCGATCTGATGCAAGTGCTCTAAATGTTGGTGTTCTCCATCTAGTACCAACATTGGAGGTGTTTCCATTATTAGCTGACCCAAAAACGTATGAGCCTAATACTATTGATCTCTCTGATCACGGTGAACTAGAATATTGGTTTAAAATATTGTCTGAGCACTTGTCTGATCTGGTGGACAAGGCTGTAGCAAGTGAAGGCGGAACTGATGATGCCAAAAGAAGGGGTGATGCTTTCTCTCGTGCATTTTCTGCCCATTTGGCAAGATTGATGGAGGAGCCTGCTGCATATGGGAAGTTAGGTTTGGCCAATCTACTGGAAATGAGGGAAGATTGCTTGAGAGAGTTCCAGTTTGTTGATGCGTATAGAAGTATAAAGCAGAGGGAAAATGAGGCATCCCTTGCTGTCTTACCTGATTTGTTGATGGAGCTTGATAATATGGATGAGGAAACACGACTACTTACTCTAATTGAAGGTGTTCTTGCTGCAAATATTTTTGACTGGGGATCTCGTGCATGTGTGGATCTCTATCATAAAGGAACTATTATTGAAATTTACAGAATGAGTCGCAATAAAATGCAGAGACCTTGGCGGGTGGATGATTTTGATGTCTTCAAAGAGAGAATGTTTGGGACTGCAAATAATAGACATCCCCCACATAGAAGAGCTTTACTTTTTGTGGATAATTCTGGTGCTGACATTGTTCTAGGGATGCTTCCCCTGGCACGGGAGCTCCTTCGTAATGGAACTGAGGTGGTTTTGGTTGCAAACTCCCTTCCTGCTTTAAATGATGTAACTGCAATGGAGCTTCCTGATATTGTTGCTGAGGCTTCCAAGCATTGTGACATTCTTAGAAGAGCTGCTGAAGCTGGAGGCTTGCTTGTGGATGCAATGAGTAATGCCTTAGATGGTTCAAAAGAAAATTCATCTTCAGCTCCCTTGATGGTTGTTGAGAATGGGTGTGGGAGTCCATGTATAGACTTAAGACAGGTCAGCTCTGAGCTTGCTGCTGCTGCAAAAGATGCTGATTTGATAATTTTGGAAGGGATGGGTAGAGCTCTTCATACCAACCTCAATGCTCGGTTTAAGTGTGATGCTCTGAAGCTTGCAATGGTTAAAAACCAGAGGTTGGCTGAAAAGTTGGTTAAAGGAAACATATATGACTGTGTTTGTAAATATGAGCCTGCCAGCTGA 2712 0.424 MADLVEGKVLGIDGIKDPETEERSKHVKSSVIKEEGMAPTSGNSIHRSSSRPQLDVSKAEIQGNVEERDPTILLPNQSDDISHLALDIGGSLIKLVYFSRHEDRSVNDKRKRSMKERLGISNGNRRSYPILGGRLHFVKFETSKINECLDFIYSKQLHCGGLESHYSDTVADRNSIIKATGGGSYKFADLFKERLGVSLDKEDEMDCLVAGANFLLKAIRHEAFTHIEGQKDFVQIDPNDLFPYLLVNIGSGVSMIKVDGDGKFERVSGTNVGGGTYWGLGRLLTKCKSFDELLELSQKGDNRTIDMLVGDIYGGMDYSKIGLSASTIASSFGKTISEKKELQGYRPEDISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVHFWSKGAAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPMGAPYTGGKIHGPPLGDLNEKISWMEKFLQKGTEITAPVPMTPARTTGLGGFEVPLSKGSSLRSDASALNVGVLHLVPTLEVFPLLADPKTYEPNTIDLSDHGELEYWFKILSEHLSDLVDKAVASEGGTDDAKRRGDAFSRAFSAHLARLMEEPAAYGKLGLANLLEMREDCLREFQFVDAYRSIKQRENEASLAVLPDLLMELDNMDEETRLLTLIEGVLAANIFDWGSRACVDLYHKGTIIEIYRMSRNKMQRPWRVDDFDVFKERMFGTANNRHPPHRRALLFVDNSGADIVLGMLPLARELLRNGTEVVLVANSLPALNDVTAMELPDIVAEASKHCDILRRAAEAGGLLVDAMSNALDGSKENSSSAPLMVVENGCGSPCIDLRQVSSELAAAAKDADLIILEGMGRALHTNLNARFKCDALKLAMVKNQRLAEKLVKGNIYDCVCKYEPAS 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0583 903 Pfam Fumble 83 425 IPR004567 GO:0004594|GO:0005524|GO:0015937
Dere14g0583 903 SUPERFAMILY AF1104-like 518 901 IPR036075 -
Dere14g0583 903 Gene3D - 304 416 - -
Dere14g0583 903 PANTHER PANTOTHENATE KINASE 53 795 IPR004567 GO:0004594|GO:0005524|GO:0015937
Dere14g0583 903 FunFam Pantothenate kinase 2 75 235 - -
Dere14g0583 903 MobiDBLite consensus disorder prediction 15 32 - -
Dere14g0583 903 SUPERFAMILY Actin-like ATPase domain 194 427 IPR043129 -
Dere14g0583 903 FunFam Pantothenate kinase 1 83 221 - -
Dere14g0583 903 MobiDBLite consensus disorder prediction 41 56 - -
Dere14g0583 903 MobiDBLite consensus disorder prediction 15 56 - -
Dere14g0583 903 FunFam Pantothenate kinase 2 539 625 - -
Dere14g0583 903 NCBIfam type II pantothenate kinase 83 426 IPR004567 GO:0004594|GO:0005524|GO:0015937
Dere14g0583 903 SUPERFAMILY Actin-like ATPase domain 81 222 IPR043129 -
Dere14g0583 903 Gene3D - 540 625 IPR035073 -
Dere14g0583 903 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 704 901 - -
Dere14g0583 903 FunFam Pantothenate kinase 2 222 407 - -
Dere14g0583 903 Gene3D - 75 234 - -
Dere14g0583 903 PIRSF PanK_long 37 903 IPR015844 GO:0004594|GO:0015937
Dere14g0583 903 Pfam Damage-control phosphatase ARMT1-like domain 611 889 IPR002791 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0583 Dere-ChrDere14 6125831 6142161 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0781 03 12312499 12329029 Dere14g0583 14 6125831 6142161 CCT
Dere03g0781 03 12312499 12329029 Dere14g0583 14 6125831 6142161 ECH
Dere14g0583 14 6125831 6142161 Dere14g0583 14 6125831 6142161 ECH