Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0781 ATGGCTGGCCTGACAGAAGATCAAGGTCTTGGGACTCGCGCTACAAAGGACCCGGAGGCTGAGGAGGAGAAGAAACGCACACAGAAGACCGTGGTCAAGGAGGAGGGTGGCCAAGGGGAGAGGGATATGGCACCCACATCCGGCAATCCAATTCACCGGTCGAGTTCAAGGCCCCAGCTCGATGTCAGTAAAGCTGAAATTCAAGGAAATGTGGAGGAGAAGTATCCCACTATTTTGTTACCCAATCAATCTGATGATATATCTCACCTGGCTCTTGACCTTGGAGGATCTCTGATAAAGTTGGTGTACTTTTCAAGACACGAAAAGCAATCAGTCAATGATAAAAGGAAGAAAAGTATGAAGGAGCGACTGGGAATTTCGAATGTTAACAGGAGAAGCTATCCTATTCTTGGTGGGAGACTTCATTTTGTGAAGTTTGAGACAAGCAAGATTAATGAGTGCCTAGACTTCATTTATTCGAAGCAACTTCACTGCGGTGGGTTGGAATCGCGTTACTCTGATAATGTGGCTGATCGGAATGCCATAATTAAGGCTACAGGTGGTGGAGCCTACAAATTTGCTGACCTTTTCAAAGAAAGACTTGGGGTTAGTCTTGACAAAGAAGACGAAATGGCCTGTCTTGTGTCAGGAGCAAATTTCTTGCTCAAGGCAATTCGTCATGAAGCTTTCACACATATGGAGGGCCAAAAAGAGTTTTATCAAATTGACCCTAATGATTTGTTTCCTTATCTTCTTGTTAATATTGGATCTGGTGTTAGTATGATCAAGGTTGATGGGGATGGGAAATATGAAAGGGTCAGTGGCACAAATGTTGGTGGTGGTACTTATTGGGGCTTGGGAAGACTTTTGACAAAGTGCAACAGTTTTGATGAGTTGCTTGAGCTGAGTCAAAAAGGAGATAACAGAACCATTGATATGCTTGTTGGGGACATTTATGGTGGTATGGACTACTCTAAGATTGGCCTATCAGCTTCAACCATAGCTTCAAGTTTTGGCAAGACTATATCCGAAAAAAAGGAGCTCGAAGACTACAGACCTGAAGATATCTCACTCTCTCTTCTACGAATGATTTCATACAATATTGGCCAGATATCTTACTTGAATGCATTGCGATTTGGGCTGAAGCGTATCTTTTTTGGAGGATTTTTTATACGGGGTCATGCCTATACAATGGACACTATTTCTTTTGCAGTTCAGTTCTGGTCTAAAGGGGAAGCTCAAGCAATGTTCTTGCGACATGAAGGGTTCCTGGGAGCTTTGGGTGCATTTATGAGCTATGAAAAGCATGGTTTGGATGACCTCATGGTGCATCAGTTAGTTGAAAGATTTCCCATAGGTGCTCCATATACAGGAGGCAAGATTCATGGTCCACCACTTGGTGATTTAAATGAGAAGATTTCATGGATGGAGAAGTTTTTGCAAAAGGGAACTGAGATAACTGCACCTGTGCCAATGATTCCACCTGGAACTACTGGACTTGGGGGTTTTGAAGTTCCTTTGTCGAAAGGAAGTGCTCTGCGATCTGATGCAAGTGCTCTAAATGTTGGTGTTCTCCATCTTGTACCAACTTTGGAGGTGTTTCCATTATTAGCTGACCCCAAAATGTATGAGCCTAACACCATTGATCTCTCAGATCATAGTGAATTAGAATATTGGTTCACCATTTTGTCAGAGCACTTGCCTGATCTCGTGGATAAGGCTGTAGCAAGTGAAGGTGGAACTGATGATGCCAAAAGAAGGGGTGATGCTTTCGCTCGTGCATTGTCTGCTCACTTGGCAAGATTGATGGAGGAACCTGCTGCATATGGGAAGTTAGGCTTGGCCAATCTATTGGAAATGAGAGAAGAGTGCTTGAGAGAATTTCAATTTGTTGATGCCTATAAAAGTATAAAGCAGAGGGAAAATGAGGCCTCACTTGCTGTTTTACCTGACTTGTTAATGGAGCTTGACGGTATGGATGAGGAAACAAGACTACTTGCACTAATCGAAGGTGTTCTTGCTGCAAACATTTTTGATTGGGGATCTCGTGCATGCGTGGATCTTTATCACGAAGGAACAATTATTGAAATTTACAGAATGAGTCGCAATAAAATGCAAAGACCGTGGCGGGTGGATAATTTTGATGTTTTCAAAGAGAGAATGTTAGGGACTGGGAACAGAAAACCTACCCCACACAAAAGAGCTTTAGTGTTCGTGGACAATGCAGGTGCCGATGTTGTTCTAGGGATGCTTCCCCTAGCACGGGAGCTCCTTCGTCATGGAACTGAAGTGGTTCTGGTTGCAAATTCCCTTCCTGCACTAAATGATGTAACTGCAATAGAACTTCCTGACATTGTTGCTGAGGCTGCCAAGCATTGTGACATTCTTAGGCGAGCTGCTGAAGCTGGAGGCTTACTTGTGGATGCAATGATTAACACCGTAGAAAGTTCTAAAGAAAGTTCATCTTCAGTTCCCCTGATGGTTGTTGAGAATGGGTGTGGGAGTCCGTGTATAGACTTTAGACAGGTCAGCTCTGAGTTGGCTGCTGCTGCAAAAGATGCGGATTTGATAATTTTGGAAGGGATGGGTAGAGCTCTTCACACCAACTTCAATGCTCGGTTTAAGTGTGATGCTTTGAAGCTAGCAATGGTGAAGAACCAGAGGTTGGCTGAAAAGTTGGTTAAAGGGAACATATACGACTGCGTTTGCAAATATGAGCCTACTAGTTGA 2730 0.4352 MAGLTEDQGLGTRATKDPEAEEEKKRTQKTVVKEEGGQGERDMAPTSGNPIHRSSSRPQLDVSKAEIQGNVEEKYPTILLPNQSDDISHLALDLGGSLIKLVYFSRHEKQSVNDKRKKSMKERLGISNVNRRSYPILGGRLHFVKFETSKINECLDFIYSKQLHCGGLESRYSDNVADRNAIIKATGGGAYKFADLFKERLGVSLDKEDEMACLVSGANFLLKAIRHEAFTHMEGQKEFYQIDPNDLFPYLLVNIGSGVSMIKVDGDGKYERVSGTNVGGGTYWGLGRLLTKCNSFDELLELSQKGDNRTIDMLVGDIYGGMDYSKIGLSASTIASSFGKTISEKKELEDYRPEDISLSLLRMISYNIGQISYLNALRFGLKRIFFGGFFIRGHAYTMDTISFAVQFWSKGEAQAMFLRHEGFLGALGAFMSYEKHGLDDLMVHQLVERFPIGAPYTGGKIHGPPLGDLNEKISWMEKFLQKGTEITAPVPMIPPGTTGLGGFEVPLSKGSALRSDASALNVGVLHLVPTLEVFPLLADPKMYEPNTIDLSDHSELEYWFTILSEHLPDLVDKAVASEGGTDDAKRRGDAFARALSAHLARLMEEPAAYGKLGLANLLEMREECLREFQFVDAYKSIKQRENEASLAVLPDLLMELDGMDEETRLLALIEGVLAANIFDWGSRACVDLYHEGTIIEIYRMSRNKMQRPWRVDNFDVFKERMLGTGNRKPTPHKRALVFVDNAGADVVLGMLPLARELLRHGTEVVLVANSLPALNDVTAIELPDIVAEAAKHCDILRRAAEAGGLLVDAMINTVESSKESSSSVPLMVVENGCGSPCIDFRQVSSELAAAAKDADLIILEGMGRALHTNFNARFKCDALKLAMVKNQRLAEKLVKGNIYDCVCKYEPTS 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0781 909 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 711 907 - -
Dere03g0781 909 MobiDBLite consensus disorder prediction 12 40 - -
Dere03g0781 909 FunFam Pantothenate kinase 1 89 227 - -
Dere03g0781 909 Gene3D - 81 240 - -
Dere03g0781 909 PANTHER PANTOTHENATE KINASE 59 801 IPR004567 GO:0004594|GO:0005524|GO:0015937
Dere03g0781 909 MobiDBLite consensus disorder prediction 1 61 - -
Dere03g0781 909 Pfam Fumble 89 431 IPR004567 GO:0004594|GO:0005524|GO:0015937
Dere03g0781 909 SUPERFAMILY AF1104-like 525 907 IPR036075 -
Dere03g0781 909 NCBIfam type II pantothenate kinase 89 432 IPR004567 GO:0004594|GO:0005524|GO:0015937
Dere03g0781 909 FunFam Pantothenate kinase 2 81 241 - -
Dere03g0781 909 Gene3D - 546 631 IPR035073 -
Dere03g0781 909 Gene3D - 313 422 - -
Dere03g0781 909 FunFam Pantothenate kinase 2 545 631 - -
Dere03g0781 909 Pfam Damage-control phosphatase ARMT1-like domain 616 895 IPR002791 -
Dere03g0781 909 FunFam Pantothenate kinase 2 228 413 - -
Dere03g0781 909 SUPERFAMILY Actin-like ATPase domain 200 433 IPR043129 -
Dere03g0781 909 PIRSF PanK_long 43 909 IPR015844 GO:0004594|GO:0015937
Dere03g0781 909 SUPERFAMILY Actin-like ATPase domain 87 228 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0781 Dere-ChrDere03 12312499 12329029 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0781 03 12312499 12329029 Dere14g0583 14 6125831 6142161 CCT
Dere03g0781 03 12312499 12329029 Dere14g0583 14 6125831 6142161 ECH
Dere03g0781 03 12312499 12329029 Dere03g0781 03 12312499 12329029 ECH