Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0560 ATGAGTATTCACTTCATCTTCCTGCTCTTGTCACTCTCATCTTTCCATGTTTGTCTAGCAAACACAAGCGGGGCATTTTCGCAAACACGTTCCATACAAACAAACCCGTTCACTCCCAGATCATCTCTGGTTCGTTATTGGAAAACCCACGTCTCCAACAACCGCTCCATCCCTCAATTCCTGCTTTCCAGAGCTTCCCCTCTCTCCCCTCATGACTACGCCTTCCTCAAAAAGCTCGTCTTCCAGAAAACTCTCTCTTCACGCTACGAATCCTTCTGCTCCTTGGCCAACTTGTACTGCTCCTTCGACTCATCGTCACAACGTTCCGATGCAACCCGTCGTCCCAACAATAACGATGCCAATTTCGCCATCTACTCCAATAAACGATTCACAAACTACGGATCTTCCCGAGCCGGAGGAGGTGACTCGTTCAAGAACTACTCGGGTGGGCTGAACACCATCAACGATTCGTTCAAAAAATACAGCCAAGGCTCCACCCGCCACGATGAGCGGTTCACGAACTACGCAGAAAACAGCAATGTAGCAAATACCAACTTCACCAGCTATGGCTCCGGAGCCACCGCCGGCTCCGGCAACTTCAACAACTACGACAAGCTCGTAAACGTTCCCGATCTCGGATTCACTTCCTACGACTCCGGCGCCGACAACCGCCAGCTGTCATTCTCCAGCTATGGAAACGAGACCAACTCTGGTGCCCAATCATTCGCGAGTTACGGCAAGAAAGGTCAAGCGGGACCCACTGATTTCACCAACTACGCGGTTAGCTCCAACATCCTGCAATCCGACTTCACGGGTTATGGCGAATCGGGTAGACGAGCAAACGACACCTTTAAATCCTACGGTACTTCCGGTAACAACCCGAAAACCACTTTCAAGACCTACGGATCCGGGTCTGCCTCAGGATCCGAAACGTTCACGAGTTACCGGAACGGTGCGAATGTGGGTGACGATTCCTTCCAGAGCTATGCCGCAAGATCTAGGTCAACTTCGGCGAGTTTCGAGAACTACGGGCGATCCTTCAACGTTGGGAACGATACTTTCAAGGAGTACGGTAAGGGAGCAGTAGGTCCGACCACAATCGGGTTCAAGTCATACGGGTTGGGCCGGTCGTTTAAAGATTACAACAGACAGGGTGTTTCATTTTCGGAGTACCGTAATTTCAGCGGGTCCAGTGGCAAAATCGTGAATAAATGGGTAGAGCCGGGTAAATTTTTCAGGGAGTCGATGATGAAGGAAGGAAATGTCATGGTGATGCCGGACATAAGAGACAAGATGCCAGAAAGGTCGTTTTTGCCCGGGGCTATTTCATCAAAATTACCATTCTCGTCGTCGTTGCTGGCGGAGATTAAGCAAGTGTTCCACGCGCGGGAGGGATCGGCGATGGAGCGCGTGATAGTGAAGGCATTGGAAGAGTGCGAGAGGGCTCCGAGCCGGGGCGAGACGAAACGGTGCGTAGGATCAGGTGAAGCCATGATACAGTTCGCCGTGTCCGTGCTGGGACCCAACGTGGTAATGAGGAGCACGGAGAGCGTGAATGGATCAAGCGGGAGTGTGATGATTGGAGGAGTCAAAGCGATCAACGGTGGGAAAGTGACAAAATCAGTTTCATGCCATCAGAGTTTGTACCCGTACCTACTGTATTACTGTCACTCTGTCCCCAGAGTGAGAGTGTATGAAGCTGAGATTCTTGACGTGGACACGAAGGTGAAAATCAATCATGGGGTTGCCATTTGTCATCTGGACACGTCATCGTGGGGCCCAACACATGGGGCCTTCTTAGCACTGGGGTCCAGCCCCGGCAAGATCGAAGTGTGCCACTGGATATTCGAGAACGACGTGACGTGGAGCACTGCTGACTGA 1881 0.5157 MSIHFIFLLLSLSSFHVCLANTSGAFSQTRSIQTNPFTPRSSLVRYWKTHVSNNRSIPQFLLSRASPLSPHDYAFLKKLVFQKTLSSRYESFCSLANLYCSFDSSSQRSDATRRPNNNDANFAIYSNKRFTNYGSSRAGGGDSFKNYSGGLNTINDSFKKYSQGSTRHDERFTNYAENSNVANTNFTSYGSGATAGSGNFNNYDKLVNVPDLGFTSYDSGADNRQLSFSSYGNETNSGAQSFASYGKKGQAGPTDFTNYAVSSNILQSDFTGYGESGRRANDTFKSYGTSGNNPKTTFKTYGSGSASGSETFTSYRNGANVGDDSFQSYAARSRSTSASFENYGRSFNVGNDTFKEYGKGAVGPTTIGFKSYGLGRSFKDYNRQGVSFSEYRNFSGSSGKIVNKWVEPGKFFRESMMKEGNVMVMPDIRDKMPERSFLPGAISSKLPFSSSLLAEIKQVFHAREGSAMERVIVKALEECERAPSRGETKRCVGSGEAMIQFAVSVLGPNVVMRSTESVNGSSGSVMIGGVKAINGGKVTKSVSCHQSLYPYLLYYCHSVPRVRVYEAEILDVDTKVKINHGVAICHLDTSSWGPTHGAFLALGSSPGKIEVCHWIFENDVTWSTAD 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0560 626 ProSiteProfiles BURP domain profile. 411 625 IPR004873 -
Dere14g0560 626 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 25 626 - -
Dere14g0560 626 Pfam BURP domain 411 623 IPR004873 -
Dere14g0560 626 SMART BURP_2 409 625 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0560 Dere-ChrDere14 5707584 5709606 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g1204 13 16736511 16738496 Dere14g0560 14 5707584 5709606 ECH
Dere14g0560 14 5707584 5709606 Dere14g0560 14 5707584 5709606 ECH