Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g1204 ATGAATACTCCCTTCCTCCTCTTACTCCTCTACTCATCCTTCAGTGTTGGTTTCTCCGCCGATGGGAGCTCCGGGGATGCGTTGGCGGGAGAGAAAAACCCATTCACCCCTAAGGCTTTTCTAATTCGGTATTGGGACAATAAGATCACTAACAATCTGCCAAAACCACCGTTTCTGTTCTCAAAGGCTTCGCCGTTAAGCGCTGTGGAGTCAGCCACTTTTACCAAGCTCGCCGCCAACCACGCGCTCTCCACGCGCCTTCCTGGATTCTGCTCGTCCGCTCACCTGTTCTGTTTCCCAGAGTTGGCGCGCAGCCTAGAGAAGCACGACCAAGATGTCAACTTTGCAGTATACCAGGATTTCAAGAATTTCACCAATTACGGATCGGATCGACTCGGTGGAAAGGACTCCTTCAAGAACTACTCCGATGGTGAAAATACCGGGCTGAACGATTTTCGGAGATATAGTCGGGATTCCGCCGGCCACAAAGACAACTTCCTCAACTACGGTCCCGGCGGCAACGAGATGGATCAGGGCTTTCACTCCTACGGAACCGGAGCTACCGGCGGCGCCGGTGAGTTCAAGCGGTACGCCAATTCAGTCAACGTGCCAGAGCTCCGATTCACCTCCTACTCTGATGGCACCAATGGGAGGAGGCAGTCGTTCACCAGCTACTCCGACGATGCAAATGCAGGAGACCAAGCCTTCACTAGCTATGGCAAAAACGGGAATGGCGCTCTTAGCGAGTTCACAAGCTACATGACAGACTCCAACGTTATTGCGTCTAACTTCTCAAACTACGGCGAGACTGCCAATGCCACTGATAGCTTTACCAGTTACAGAGATGATTCCAATATCGGCTCCGAGTCCTTCCAGTCATATTCGAAGAACTCAAACACCGCAAAAGTTGATTTCACAAGTTATGGGAAAGACGACAACCAAGGCACAGACACGTTCACAGGGTACGGTAAAGGAGCAAAGGGACACAAGGTCGGGTTCAAAGGGTATATTGGCTTCAGCGATACCCACAACTTCAAGGAATATGCTAAAAAGGGTGTCTCATTCGCAAGATATACAAATGATAGCTCCACACAAGGTGCTTCCATGGCGTCCAGAGCTACCAATGTCAGTTTGGTAAATAAGTGGGTTGAGCCAGGAAAGTTCTTTCGTGAGTCCATGTTGAAGGAAGGGACGGTGATGCCTATGCCGGATATAAGAGATAGAATGCCCAAAAGGTCGTTTTTGCCCCGAGCAATTCTTTCCAAATTACCGTTTTCCACTTCGAAGATCTCTGAGCTGAAGCAAATTTTCAAGGTGGCTGATAACTCGTCCATGGAAATGATTCTAATGAGTTCGTTGAGGGAGTGCGAGAGGGCACCGAGCCGGCGTGAGACCAAGCAGTGCGTGGGCTCGATCGAGGACATGATCGACTTTGCCGCTTCGGTGCTGGGTCACAACATAACGGTTCGGACCACTGAGAATTTAAACGGGTCAAAGAAGAAGGTGGTGGTGGGTTCTATCAAACGTATCAATGGCGGTAGAACCAGTCAGGCCGTCTCGTGCCACCAGAGCTTGTTTCCTTATTTGCTTTATTACTGCCACTCGGTTCCAAAGGTTCGGGTCTACGAAGCGGATCTTTTGGATCCGAATAGCAAGGCCAAGATCAATCATGGTGTTGCCATTTGCCACTTGGACACAACAGCTTGGAGTCCAACTCACGGAGCCTTCCTGTCTCTCGGGTCGGTTCCGGGTCGGATTGAAGTTTGCCACTGGATTTTCCAGAATGATATGACCTGGACTGTTGCTGATTAA 1812 0.5017 MNTPFLLLLLYSSFSVGFSADGSSGDALAGEKNPFTPKAFLIRYWDNKITNNLPKPPFLFSKASPLSAVESATFTKLAANHALSTRLPGFCSSAHLFCFPELARSLEKHDQDVNFAVYQDFKNFTNYGSDRLGGKDSFKNYSDGENTGLNDFRRYSRDSAGHKDNFLNYGPGGNEMDQGFHSYGTGATGGAGEFKRYANSVNVPELRFTSYSDGTNGRRQSFTSYSDDANAGDQAFTSYGKNGNGALSEFTSYMTDSNVIASNFSNYGETANATDSFTSYRDDSNIGSESFQSYSKNSNTAKVDFTSYGKDDNQGTDTFTGYGKGAKGHKVGFKGYIGFSDTHNFKEYAKKGVSFARYTNDSSTQGASMASRATNVSLVNKWVEPGKFFRESMLKEGTVMPMPDIRDRMPKRSFLPRAILSKLPFSTSKISELKQIFKVADNSSMEMILMSSLRECERAPSRRETKQCVGSIEDMIDFAASVLGHNITVRTTENLNGSKKKVVVGSIKRINGGRTSQAVSCHQSLFPYLLYYCHSVPKVRVYEADLLDPNSKAKINHGVAICHLDTTAWSPTHGAFLSLGSVPGRIEVCHWIFQNDMTWTVAD 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g1204 603 Pfam BURP domain 388 600 IPR004873 -
Dere13g1204 603 SMART BURP_2 386 602 IPR004873 -
Dere13g1204 603 ProSiteProfiles BURP domain profile. 388 602 IPR004873 -
Dere13g1204 603 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 273 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g1204 Dere-ChrDere13 16736511 16738496 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere09g1568 09 19983412 19985430 Dere13g1204 13 16736511 16738496 CCT
Dere13g1204 13 16736511 16738496 Dere14g0560 14 5707584 5709606 ECH
Dere13g1204 13 16736511 16738496 Dere13g1204 13 16736511 16738496 ECH