Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0510 ATGAAGAGAGGCAGATTAGAAAAGTTAGATACTTTTGTGTCATTAACAAGGCAAAGATCCATCCAGATTCTGATCGGAGTTGGGCTTTTGTATATACTGTTGGTTACGGTGGAAATTCCTTTCGTATTCAGAACTGGGTTCAGTTCTGTGTCTCAGGAGTTCGTGACTCGCCCTTCCAGACTCGAGAGCGAGGAGGACTTGGAAGAAAGAGAAGCCCCTTCTCGCCCGCTGGAAAGAGTTTCTAAACACGCATACCAACCGATTCCGAGCCAACTCGCGAAGCACAAGATTCTTTCAGGGTTGATCTTCGATAACAGTACATTCGATTTGCGAGGTAAGGATGGGCCTCTGGAGCTTTACAAGTTAGCAGAGAATGCGTGGAAAGTGGGGAAGAAGATTTGGGAAGAGCTAGAATCGGGGAAATCGCGTGCCGGCGCCGACAAATCCGAGTACCGATCAGATTCGTGCCCGGGTTCGATTTCGTTATCCGGGTCGGAGTTTTTGGCTCATGGGCAAGTCATGGTCCTTCCTTGTGGACTGACATTGGGGTCCCACGTGACAGTTGTGGCGAAGCCGTTGGCGGCACACCCAGAGTTTGAACCGAAGATATCTTTGGTGAAGGATGATGATGAACCGGTGATGGTGTCGCAGTTCATCATGGAGTTGCAGGGTTTGAAAACAGTGGACGGCGAGGAACCCCCTAGGATTTTGCATTTCAATCCCAGATTGAAAGGAGATTGGAGTGAAAAGCCTGTAATTGAGTTAAACACCTGTTACCGAATGCAGTGGGGTTCGGCGCTGCGGTGTGATGGATGGAAATCAAAGGCTGATGAAGAGACTGTTGATGGGCTGGTGAAGTGTGAGAAGTGGATTCGTGATGATGACAATCATGCAGAGGAGTCAAAGGCAAGATGGTGGTTGAATAGACTGATAGGCCGGACAAAAAAAGTATCAGTTGACTGGCCATTCCCATTTTCTGAGAACAAGCTATTTGTCCTCACTCTTAGTGCTGGATTGGAGGGCTATCATGTTAATGTTGATGGGAGGCATGTGGCCTCTTTTCCTTATCGCACTGGTTTTACTCTTGAGGATGCCACTGGGCTTTCTTTAAGTGGAGACATTGATGTCCACTCTGTGTTTGCTGCCTCTTTGCCTTCAACACATCCAAGTTTTGCCCCCCAGAAGCATCTTGACTGGTCAAGCAGATGGCAAGCCCCTCCTCTTCCTGATTTTGATGTTGAAATGTTCATTGGCATCCTTTCTGCTGGAAATCACTTTGCTGAGCGGATGGCTGTAAGAAGATCATGGATGCAGCACAGGCTTATCAAATCTTCGAAAGTGGTGGCCCGCTTCTTTGTAGCACCGCATCCGAGAAAAGAAGTTAATGCAGAGTTAAAGAAGGAAGCAGAATTTTTTGGTGATATTGTTATTGTGCCTTACATGGATAACTATGACCTTGTTGTGCTGAAAACAGTGGCCATCTGTGAATATGGGGTTCGCTCAGTTTCTGCAAAGTATATTATGAAGGGTGATGATGACACTTTTGTAAGAGTGGATGCTGTATTGAATTTAGCAAGGGACGTTCCGGATGATAGGAGCTTTTATATTGGGAACATAAATTACTACCATAAACCTTTGCGCTCTGGTAAATGGGCTGTGACATATGAGGAGTGGCCAGAAGAGGATTACCCACCCTATGCTAATGGGCCTGGTTATATTTTGTCTTCTGATATTGCACGCTACGTTGTATCTGAATTTGGAATGCATAAATTAAGGTTGTTCAAAATGGAAGATGTGAGTATGGGAATGTGGGTAGAGCAATTTAACAACACGAAACCAGTAGAGTATTTACATAGCTTAAAATTCTGCCAGTTCGGTTGCATAGAAGAGTATTACACAGCTCATTACCAATCGCCAAGGCAGATGATGTGCATGTGGGATAACTTGCAAAGACTGATAAAGCCTCAGTGCTGCAATATGAGATGA 1986 0.4552 MKRGRLEKLDTFVSLTRQRSIQILIGVGLLYILLVTVEIPFVFRTGFSSVSQEFVTRPSRLESEEDLEEREAPSRPLERVSKHAYQPIPSQLAKHKILSGLIFDNSTFDLRGKDGPLELYKLAENAWKVGKKIWEELESGKSRAGADKSEYRSDSCPGSISLSGSEFLAHGQVMVLPCGLTLGSHVTVVAKPLAAHPEFEPKISLVKDDDEPVMVSQFIMELQGLKTVDGEEPPRILHFNPRLKGDWSEKPVIELNTCYRMQWGSALRCDGWKSKADEETVDGLVKCEKWIRDDDNHAEESKARWWLNRLIGRTKKVSVDWPFPFSENKLFVLTLSAGLEGYHVNVDGRHVASFPYRTGFTLEDATGLSLSGDIDVHSVFAASLPSTHPSFAPQKHLDWSSRWQAPPLPDFDVEMFIGILSAGNHFAERMAVRRSWMQHRLIKSSKVVARFFVAPHPRKEVNAELKKEAEFFGDIVIVPYMDNYDLVVLKTVAICEYGVRSVSAKYIMKGDDDTFVRVDAVLNLARDVPDDRSFYIGNINYYHKPLRSGKWAVTYEEWPEEDYPPYANGPGYILSSDIARYVVSEFGMHKLRLFKMEDVSMGMWVEQFNNTKPVEYLHSLKFCQFGCIEEYYTAHYQSPRQMMCMWDNLQRLIKPQCCNMR 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0510 661 SUPERFAMILY Concanavalin A-like lectins/glucanases 173 380 IPR013320 -
Dere14g0510 661 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 172 382 IPR001079 GO:0030246
Dere14g0510 661 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 363 610 IPR002659 GO:0006486|GO:0016020|GO:0016758
Dere14g0510 661 MobiDBLite consensus disorder prediction 61 80 - -
Dere14g0510 661 Gene3D - 173 380 - -
Dere14g0510 661 Pfam Galactosyltransferase 428 608 IPR002659 GO:0006486|GO:0016020|GO:0016758
Dere14g0510 661 Pfam Galactoside-binding lectin 173 380 IPR001079 GO:0030246
Dere14g0510 661 FunFam Hydroxyproline O-galactosyltransferase GALT2 296 380 - -
Dere14g0510 661 SMART Gal_bind_lectin_2 176 381 IPR001079 GO:0030246
Dere14g0510 661 FunFam Hydroxyproline O-galactosyltransferase 406 649 - -
Dere14g0510 661 Gene3D - 412 656 - -
Dere14g0510 661 FunFam Hydroxyproline O-galactosyltransferase GALT4 171 289 - -
Dere14g0510 661 CDD GLECT 176 380 IPR001079 GO:0030246
Dere14g0510 661 MobiDBLite consensus disorder prediction 61 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0510 Dere-ChrDere14 5282006 5285295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere14g0510 5 661 Glycosyltransferase AT1G74800 65.723 0.0 924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0864 03 13282144 13285578 Dere14g0510 14 5282006 5285295 CCT
Dere14g0510 14 5282006 5285295 Dere14g0510 14 5282006 5285295 ECH