Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g0864 ATGAAAAGAGGCAGACTAGAAAAATTAGATACTTTTGTGTCATTAACCAGGCGAAGACCCATTCAGATTCTGATCGTATTCGGACTCTTGTATATACTGTTGGTCACGCTGGAAATCCCCTTTGTGTTCAAATTTGGGTTTAGTGCTGTGTCTCATGAGTGCTTGACTCGTCATCGTAGGCTGGAAAGCGAGGAGGACTTTGAACAAAGAGAAGCCCCAACTCGTCCTCTTCAAAGAGTTTCTCGAAATGCTAACAAACTCACTCACAGGCAACTAAATGAGGACAGGATTATGTCTGGCTTGATCTTCGATGACAGTATAGTTCATTTGTGGGGTAAGGATGGGTCCTCCGAGCTGTACGAGTCAGCAAAGAATGCTTGGATTGTGGGTAAGAAGATTTGGGAAGAGTTGGAAACGATGGACTTGAGGACTCTCCCTGAAAAGTCTGAGAACCTATCAGAGTCATGTCCACCCTCGATTTCTGTATCGGGTTCAGAGTTTGTGGCTCGTGGGCTGGTCATGGTCCTTCCTTGTGGACTGACATTGGGGTCCCACATAACAGTAGTAGGAAAGCCGCAGGAGGCGCACCTACGTGCGGTTCATCGGGTTAGAGTGTCGCAGTTTGTCATGGAATTGCAGGGTTTGAAGACTGTGGACGGCGAGGATCCCCCAAGAATATTGCATTTTAACCCCCGATTGAAGGGAGATTGGAGTGGGAAGCCTGTAATTGAGCAGAACACTTGTTACAGAATGCATTGGGGTTCAGCGCAGCGGTGTGGCGGTTGGAAATCAAAGGCTGATGAAGAGACAGTTGATGCACAGGTGAAGTGTGAGAAATGGATTCGGGATGATGACACTCACATAGTGGAGTCTAAGGCAACATGGTGGTTGAATAGACTTATTGGCCGGACAAGAAAAGTGGCAGTTGACTGGCCATTCCCATTTGCTGAGGGCAAGCTGTTTGTTCTTACTCTTAGGGCTGGAATGGAGGGCTTTCATGTTATTGTTGATGGGAGGCATGTGACCTCTTTTCCTTATCGCACTGGTTTTACTCTTGAGGATGCCACTGGGCTTTCTTTGAGTGGAGACATTGATGTCCACTCCATTTTCGCTGCCTCTTTGCCTTCAGTACATCCTAGTTTTGCTCCACAGCAGCTTCTTGACTTGTCAAGCAGATGGCGTGCCCCACCACTTCCTGGCTTTGACATAGGACTGTTCATTGGAGTCCTTTCTGCTGGAAACCATTTTGCTGAGAGGATGGCTGTACGGAAGTCATGGATGCAGCACAGCCTCATCAAATCTTCAAGAGTGGTGATTCGTTTCTTTGTAGCAATGCATTCAAGAAAAGAAGTGAATATAGAGTTAAAGAAGGAAGCAAAATTTTTTGGAGATATTGTTATATTGCCGTATATGGATAACTATGACCTTGTTGTCTTGAAAACAGCATCTATATGTGAATATGGGGTTCGCACAGTTTCTGCCAAGTATATAATGAAGTGTGATGATGACACTTTTGTTAGAGTGGATGCTGTTTTAAATGAAGCAAGGAAGGTTCCAGGAGATAAGAGCTTTTATATTGGTAACATAAATCACTTCCACAAACCCTTGCGCCATGGTAAATGGGCTGTGACGTACCAGGAGTGGCCAGAGGAGAGGTACCCTCCCTATGCTAATGGACCAGGTTATATCTTGTCTTCTGACATTGCAAAATACATCGTATCTGAATTTGAGAACCATAAATTAAGGTTGTTCAAGATGGAAGATGTTAGTATGGGAATGTGGGTGAAGCAATTTAACAGCTCCAAACCAGTAGTTTATGTACATAGCTTGAAGTTCTGCCAGTTTGGCTGCATAGATAATTATTACACAGCCCATTACCAATCACCAAGACAAATGAAGTGCCTGTGGGATAGATTGCAAACGAAGACAAGGCCTCAGTGCTGCAATATGAGATAA 1956 0.4463 MKRGRLEKLDTFVSLTRRRPIQILIVFGLLYILLVTLEIPFVFKFGFSAVSHECLTRHRRLESEEDFEQREAPTRPLQRVSRNANKLTHRQLNEDRIMSGLIFDDSIVHLWGKDGSSELYESAKNAWIVGKKIWEELETMDLRTLPEKSENLSESCPPSISVSGSEFVARGLVMVLPCGLTLGSHITVVGKPQEAHLRAVHRVRVSQFVMELQGLKTVDGEDPPRILHFNPRLKGDWSGKPVIEQNTCYRMHWGSAQRCGGWKSKADEETVDAQVKCEKWIRDDDTHIVESKATWWLNRLIGRTRKVAVDWPFPFAEGKLFVLTLRAGMEGFHVIVDGRHVTSFPYRTGFTLEDATGLSLSGDIDVHSIFAASLPSVHPSFAPQQLLDLSSRWRAPPLPGFDIGLFIGVLSAGNHFAERMAVRKSWMQHSLIKSSRVVIRFFVAMHSRKEVNIELKKEAKFFGDIVILPYMDNYDLVVLKTASICEYGVRTVSAKYIMKCDDDTFVRVDAVLNEARKVPGDKSFYIGNINHFHKPLRHGKWAVTYQEWPEERYPPYANGPGYILSSDIAKYIVSEFENHKLRLFKMEDVSMGMWVKQFNSSKPVVYVHSLKFCQFGCIDNYYTAHYQSPRQMKCLWDRLQTKTRPQCCNMR 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g0864 651 Pfam Galactoside-binding lectin 173 370 IPR001079 GO:0030246
Dere03g0864 651 Gene3D - 168 288 - -
Dere03g0864 651 SMART Gal_bind_lectin_2 176 371 IPR001079 GO:0030246
Dere03g0864 651 FunFam Hydroxyproline O-galactosyltransferase GALT2 286 370 - -
Dere03g0864 651 Gene3D - 404 642 - -
Dere03g0864 651 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 172 372 IPR001079 GO:0030246
Dere03g0864 651 Pfam Galactosyltransferase 418 598 IPR002659 GO:0006486|GO:0016020|GO:0016758
Dere03g0864 651 CDD GLECT 176 370 IPR001079 GO:0030246
Dere03g0864 651 FunFam Hydroxyproline O-galactosyltransferase 396 639 - -
Dere03g0864 651 SUPERFAMILY Concanavalin A-like lectins/glucanases 173 370 IPR013320 -
Dere03g0864 651 Gene3D - 291 373 - -
Dere03g0864 651 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 339 599 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g0864 Dere-ChrDere03 13282144 13285578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g0864 5 651 Glycosyltransferase AT1G74800 63.142 0.0 881
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g0864 03 13282144 13285578 Dere14g0510 14 5282006 5285295 CCT
Dere03g0864 03 13282144 13285578 Dere03g0864 03 13282144 13285578 ECH