Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0344 ATGTCGAAGCTGCTTCTACAAAGCTCTCATCTCAGTTCCTTTCACCGATTCACCACCTTCCTTGCTACTCCCTTCTCTGTCTCTACCGCCCCCGTTTCGCGCTTCCGTTTTCGAAACCGCTTCTCGGTTTCGGTTTCTTCTCTTTCGCATCCTCAACTTCCCTGCTCCCGTCAGTCACGTAGAGACCTATCTGTTCGTGCCTTTGATTCTTCGCCTCCCGAGACTAAAGACGAAGAAGAAGCTGTTGGGAAGGATGAAATTAATGATCAATTTGTCAGGATTGCTGATGAGGATTATCCGAGCGGTGAATTTGACTTTGAGCCCATTACGGGGTGGAGAGGATTTCTTGTCAAGCTAAAGATGTTGGTTGCGTTTCCTTGGGAGCGTGTCCGCAAGGGCAGCGTTCTCACTATGAAGTTGCGCGGCCAGATATCCGATCAGATAAAGAGTAGTTTCTCTCGGGGATTATCTCTACCTCAAATTTGTGAGAACTTTTTGAAAGCAGCATATGATCCTCGTATTGCTGGTATCTATCTCCATATAGATATTTTGAATTGTGGGTGGGGTAAAATAGAAGAAATTCGGAGGCACATATTGAATTTCAAAAAATCAGGAAAATTTGTCATGGCTTATGTCCCTTCATGTCAAGAAAAAGAATACTACCTCGCTTGTGCTTGTGACGAGATATTTGCTCCTCCAAGTGCATATTTTTCTTTGTTTGGCTTGACTGTTCAAGCTTCATTCCTCAGAGGTGTTTTAGATAACATAGGAATTGAACCACAAGTAGAAAGGATTGGCAAATACAAAAGTGCTGGGGATCAACTAGCCCGTAGAACCATCTCTGAAGCAAATTGTGAGATGCTGACTGCATTGCTTGATAATATCTATACAAATTGGCTGGATAAAGTCTCTTCTGCAAAAGGAAAAAAAAGAGAGGATATTGAGAATTTTATAAATGAAGGAATCTATCAAGTAGACAAGCTGAAAGAAGAGGGCTTCATAACAAACATAACCTATGATGATGAGGTTATTTCCATGTTGAAAGAGAGACTTGGAGTGAACACTAATAGAAATCTTCCTATGGTGGATTATAGAAGATATTCCAGAGTTAGGAAATGGACCGTTGGAATACCAGGTGGTAAAGACCTGATAGCTCTCATCCGAGCCTCAGGGAGTATTAGTCGCATTGAGGGTCCTTTAAGTGTGTCAAGCTCAGGTGTTATTGGAGAGAAGTTTATCGAGAAGATTCGCAGTGTGAGAGGTTCAAAAAAATATAAGGCCGCTATTATCAGAATTGACAGTCCTGGAGGTGATGCTCTTGCATCTGATTTGATGTGGAGAGAAATCAGACTTCTGGCTGCCTCAAAACCAGTCATTGCTTCAATGTCTGATGTGGCAGCAAGTGGAGGTTACTATATGGCAATGGCAGCAGGAACTATTGTTGCAGAAAGCCTTACTTTAACTGGTTCAATTGGAGTTGTCACAGGAAAATTTAACCTGGAGAAACTGTACGAGAAGATTGGATTCAATAAAGAAGTCATATCAAGGGGAAGATATGCTGAGCTCCTTGCTGCAGAACAACGTCCTTTTAGACCAGACGAAGCAGAGTTATTTGCCAAGTCTGCACAACATGCTTATAAACAATTTCGAGACAAGGCAGCATTTTCCAGATCGATGACTGTAGATAAGATGGAGGAGGTTGCACAGGGGAGAGTTTGGACGGGAAAAGATGCAGTTTCACATGGTTTGGTTGACGCTATTGGTGGGCTTTCTCGTGCAATTGCCATAGCAAAAATGAGGGCTAATATACCTAAAGACAAACAGGTTACAATTGTGGAGCTCTCAAGACCCAGCCCTTCTCTACCAGAGATTTTAAGTGGCATTGGGAGTACCCTAGTTGGAGTAGACAGAACATTGAAGGAGCTGTTACAAGGCTTGACATTTTCTGATGGAGTTCAAGCCCGGATGGATGGAATCATGTTTGAGAGACTGGAAGGATATCCTTACACCAACCCTATTTTGACACTGATAAAAGATTACCTTAGTTCGCTGTAG 2055 0.4253 MSKLLLQSSHLSSFHRFTTFLATPFSVSTAPVSRFRFRNRFSVSVSSLSHPQLPCSRQSRRDLSVRAFDSSPPETKDEEEAVGKDEINDQFVRIADEDYPSGEFDFEPITGWRGFLVKLKMLVAFPWERVRKGSVLTMKLRGQISDQIKSSFSRGLSLPQICENFLKAAYDPRIAGIYLHIDILNCGWGKIEEIRRHILNFKKSGKFVMAYVPSCQEKEYYLACACDEIFAPPSAYFSLFGLTVQASFLRGVLDNIGIEPQVERIGKYKSAGDQLARRTISEANCEMLTALLDNIYTNWLDKVSSAKGKKREDIENFINEGIYQVDKLKEEGFITNITYDDEVISMLKERLGVNTNRNLPMVDYRRYSRVRKWTVGIPGGKDLIALIRASGSISRIEGPLSVSSSGVIGEKFIEKIRSVRGSKKYKAAIIRIDSPGGDALASDLMWREIRLLAASKPVIASMSDVAASGGYYMAMAAGTIVAESLTLTGSIGVVTGKFNLEKLYEKIGFNKEVISRGRYAELLAAEQRPFRPDEAELFAKSAQHAYKQFRDKAAFSRSMTVDKMEEVAQGRVWTGKDAVSHGLVDAIGGLSRAIAIAKMRANIPKDKQVTIVELSRPSPSLPEILSGIGSTLVGVDRTLKELLQGLTFSDGVQARMDGIMFERLEGYPYTNPILTLIKDYLSSL 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0344 684 PANTHER PROTEASE 4 93 683 - -
Dere14g0344 684 Pfam Peptidase family S49 201 353 IPR002142 GO:0006508|GO:0008233
Dere14g0344 684 Pfam Peptidase family S49 452 602 IPR002142 GO:0006508|GO:0008233
Dere14g0344 684 NCBIfam signal peptide peptidase SppA 390 598 IPR004635 GO:0006508|GO:0008233
Dere14g0344 684 SUPERFAMILY ClpP/crotonase 122 338 IPR029045 -
Dere14g0344 684 SUPERFAMILY ClpP/crotonase 389 589 IPR029045 -
Dere14g0344 684 MobiDBLite consensus disorder prediction 49 82 - -
Dere14g0344 684 CDD S49_SppA_67K_type 136 349 IPR047217 -
Dere14g0344 684 Gene3D - 526 653 - -
Dere14g0344 684 PIRSF Protease_4_SppA 82 684 IPR004634 GO:0006465|GO:0008233|GO:0016020
Dere14g0344 684 CDD S49_Sppa_N_C 384 598 IPR047272 -
Dere14g0344 684 Gene3D - 380 525 - -
Dere14g0344 684 Gene3D - 133 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0344 Dere-ChrDere14 3532784 3549778 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g1049 03 16580093 16596997 Dere14g0344 14 3532784 3549778 CCT