Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere14g0263 ATGTTCTCTGGGAGCAGCAAGACTGGAGATATAAATTCCAATTTGGAGGTCCAGAGTACTTCGATTCGAAAATACCACTTCTTTGAAAAACAAAATGACAAGGTTCACATTCAGCATCGACTCGCCGCGTTCCTTATATTGGTCCTCGGAGAAGGTTTCTTACTAGTTCCCATTATCATGAAAATGAGCTACCCTGGAGGAGATTGGATGTGTGGTGTTTGCCAGCACATTAATTTCAAGAGGAGGGATGCATGCCAACGTTGTGGCTACCCCAAGTTTGGAGGTCCTGACCCTTCAACTTATGAAAGCAATAGGACACCTGAAGCCTTGGCAGGGGACTGGTTTTGCACTGCCATTGGTTGCGGAGCTCATAATTATGCAAGCCGATCAAACTGCTTCAGATGTGGTACTCTGAAATATGATTATACTGGCTCTGAAGGATACGGATCTGGTTGCAGTTTCCCCCCTGGATGGAAGCCTGGTGATTGGCTTTGCTCTAGCTGCGGAGTGCATAATTACGCTAGTAGGACAGTATGCTACAAGTGCAAGACACCGAGGGATCATGGTGAGAAAAGTCTAGTCCTGAAAGCTTTACTTCTTTGGTCCTCTTATCTTAGAAAAACCTTGACAAGATGTTATTACTTTTTAGCAAATGCTGTTCAATGCCAGTTCGATGACACATTTATAACTTGTATTTCAGGCGGTGCGGACTGA 714 0.4454 MFSGSSKTGDINSNLEVQSTSIRKYHFFEKQNDKVHIQHRLAAFLILVLGEGFLLVPIIMKMSYPGGDWMCGVCQHINFKRRDACQRCGYPKFGGPDPSTYESNRTPEALAGDWFCTAIGCGAHNYASRSNCFRCGTLKYDYTGSEGYGSGCSFPPGWKPGDWLCSSCGVHNYASRTVCYKCKTPRDHGEKSLVLKALLLWSSYLRKTLTRCYYFLANAVQCQFDDTFITCISGGAD 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere14g0263 237 SUPERFAMILY Ran binding protein zinc finger-like 110 141 IPR036443 -
Dere14g0263 237 Gene3D - 102 141 - -
Dere14g0263 237 Gene3D - 61 96 - -
Dere14g0263 237 Gene3D - 155 189 - -
Dere14g0263 237 ProSiteProfiles Zinc finger RanBP2 type profile. 110 141 IPR001876 -
Dere14g0263 237 ProSitePatterns Zinc finger RanBP2-type signature. 69 88 IPR001876 -
Dere14g0263 237 ProSiteProfiles Zinc finger RanBP2 type profile. 159 188 IPR001876 -
Dere14g0263 237 SUPERFAMILY Ran binding protein zinc finger-like 63 94 IPR036443 -
Dere14g0263 237 SMART zf_4 67 91 IPR001876 -
Dere14g0263 237 SMART zf_4 161 185 IPR001876 -
Dere14g0263 237 SMART zf_4 112 138 IPR001876 -
Dere14g0263 237 ProSitePatterns Zinc finger RanBP2-type signature. 163 182 IPR001876 -
Dere14g0263 237 ProSiteProfiles Zinc finger RanBP2 type profile. 65 94 IPR001876 -
Dere14g0263 237 SUPERFAMILY Ran binding protein zinc finger-like 156 189 IPR036443 -
Dere14g0263 237 PANTHER ZINC FINGER PROTEIN 105 190 - -
Dere14g0263 237 Pfam Zn-finger in Ran binding protein and others 159 186 IPR001876 -
Dere14g0263 237 Pfam Zn-finger in Ran binding protein and others 111 141 IPR001876 -
Dere14g0263 237 ProSitePatterns Zinc finger RanBP2-type signature. 114 135 IPR001876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere14g0263 Dere-ChrDere14 2731472 2734842 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere14g0263 14 2731472 2734842 Dere03g1158 03 18660871 18661851 CCT