Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere13g0297 ATGGGGAGGGTGAGGGGGGAGAAGGTGGAAGGAGGTATGTACAGAGAGCGAGGCGGTGTTAGGTCCAAGTCCGAGGTGTGTCCCGTCGATCGGAAGCGCATCAACGACGTCCTCGACAAGCAGCTCGAGCGATCATCTCCGTCCACTTCTAGGGCTATCAAGGCAAAGGATAGGTCCACGCAATCGCTTTTGCCCTCTAAGCCACACTCTGATCCCAGGGACTCTCGCGCTGCCTCCATATCTAAGAATTCCAATGCTTCACATGAGGACTCTGAAACAGACACTGAAGAATCTGATGTTAGTGGTTCTGATGGGGATGACACGTCTTGGATCTCATGGTTTTGCGATCTGAAAGGAAATGAATTCTTTTGCGAGGTAGATGATGATTACATACAAGATGAATTCAACCTCTGCGGATTAAGCAGTCAAGTGCCTTACTATGATTATGCTCTTGATTTAATTTTGGATGTTGAGTCCTCCCATGGTTGGTTGAAACATAAAGGCGACATGTTCACAAAGGAACAAAATGAATTAATTCAATCAGCAGCAGAAATGCTTTATGGCCTGATTCATGCTCGGTACATTTTGACCAGCAAAGGAATGGGAGCTATGTTGGACAAGTACAAGAACTATGACTTTGGCAGATGTCCAAGAGTCTACTGCTCCGGAACCCCCTGCCTTCCAGTTGGTCAGTCAGACATCCCTAGGTCAAGTACTGTAAAAATTTATTGCCCCAGGTGTGAAGACATTCATTACCCACGGTCAAAGTATCAAGGTGGGCTTGACCTCGATTATGTTGGGTTTCAAAATCCAATTTTGGTCATGTTCAAGAGGTTGGGATTTTGCCCATCTCAAGTCCGTTATATCGAAAGGGAAACCAGTGGAAGGCCAAATCCAGTAGTTCAGTTTCAGTAA 915 0.4612 MGRVRGEKVEGGMYRERGGVRSKSEVCPVDRKRINDVLDKQLERSSPSTSRAIKAKDRSTQSLLPSKPHSDPRDSRAASISKNSNASHEDSETDTEESDVSGSDGDDTSWISWFCDLKGNEFFCEVDDDYIQDEFNLCGLSSQVPYYDYALDLILDVESSHGWLKHKGDMFTKEQNELIQSAAEMLYGLIHARYILTSKGMGAMLDKYKNYDFGRCPRVYCSGTPCLPVGQSDIPRSSTVKIYCPRCEDIHYPRSKYQGGLDLDYVGFQNPILVMFKRLGFCPSQVRYIERETSGRPNPVVQFQ 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere13g0297 304 FunFam Casein kinase II subunit beta 102 212 - -
Dere13g0297 304 FunFam Casein kinase II subunit beta 213 283 - -
Dere13g0297 304 ProSitePatterns Casein kinase II regulatory subunit signature. 216 247 IPR000704 GO:0005956|GO:0019887
Dere13g0297 304 Gene3D - 213 286 - -
Dere13g0297 304 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 102 212 IPR016149 GO:0005956|GO:0019887
Dere13g0297 304 MobiDBLite consensus disorder prediction 1 105 - -
Dere13g0297 304 SMART CK_II_beta_2 109 269 IPR000704 GO:0005956|GO:0019887
Dere13g0297 304 PRINTS Casein kinase II regulatory subunit family signature 109 125 IPR000704 GO:0005956|GO:0019887
Dere13g0297 304 PRINTS Casein kinase II regulatory subunit family signature 234 255 IPR000704 GO:0005956|GO:0019887
Dere13g0297 304 PRINTS Casein kinase II regulatory subunit family signature 126 140 IPR000704 GO:0005956|GO:0019887
Dere13g0297 304 PRINTS Casein kinase II regulatory subunit family signature 187 208 IPR000704 GO:0005956|GO:0019887
Dere13g0297 304 PRINTS Casein kinase II regulatory subunit family signature 212 233 IPR000704 GO:0005956|GO:0019887
Dere13g0297 304 PANTHER CASEIN KINASE II SUBUNIT BETA 88 275 IPR000704 GO:0005956|GO:0019887
Dere13g0297 304 SUPERFAMILY Casein kinase II beta subunit 107 277 IPR035991 GO:0005956|GO:0019887
Dere13g0297 304 Pfam Casein kinase II regulatory subunit 109 275 IPR000704 GO:0005956|GO:0019887
Dere13g0297 304 MobiDBLite consensus disorder prediction 41 68 - -
Dere13g0297 304 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere13g0297 Dere-ChrDere13 4150387 4154988 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere13g0297 13 4150387 4154988 Dere09g0475 09 7581144 7587762 CCT