Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1688 ATGTCTGCTGTAGTGTGTGGAAGCAAGAGATCTTTCTTCGAAGATATTCCTCCATCACCTCCAGTGTCCAAAAGGCTCCGTTGCTCATCCTCGCCAATTCGTTTATCCGCTCCCAGTCTCGTCGATCAGCTTCGGGCCGTGTTTCCTCACATGGAAGTCCAGCTTCTGGAGAGAGCACTCCAAGAATGTGGCAATGATATAGATGCTGCTATCAAGAGCTTGCATGAGCTTTGCTTGGGATCTGCTGATGGAATTTCGGGTACTGCTGAAGAATCTGATGCTAATCTGGAAACAGGTACTTTGAAAGATGATGGGGATGCATCTGCTTCCGAGAATCAGTCAGCTTCAAACAACCTTCCTGCAGATGGAGCAGAATGGGTTGACTTGTTTGTGAGGGAAATGATGAGTGCTACTAGTGTTGATGATGCCAGAACCCGTGTTGCTAGAATGCTGGAGGTTTTAGAGAAATCAATCACTGGGCACGCAAGTGCTGAGGCAACACATGTTATTCAAAAGGAAAATATGATGTTGAAAGAGCAAATTGAAGGGCTGACTAAGGAGAACACTATTTTAAAAAGTGCTTTTAAAATCCAGCACGAACGTCAAATTGAGTATGAAAATAAGAGTCAAGAGTTGCAGCATTTGAAGCAGTTGGTGTCTCAATACCAGGAGCAGTTAAGAACTCTTGAGGTGAATAACTATGCTTTGGCAATGCATCTTAAGCAGGCTCAGCAGTGCAACTCCTTTCCTGGGCGTTTCCATCCTGATGTCTTTTAA 777 0.4453 MSAVVCGSKRSFFEDIPPSPPVSKRLRCSSSPIRLSAPSLVDQLRAVFPHMEVQLLERALQECGNDIDAAIKSLHELCLGSADGISGTAEESDANLETGTLKDDGDASASENQSASNNLPADGAEWVDLFVREMMSATSVDDARTRVARMLEVLEKSITGHASAEATHVIQKENMMLKEQIEGLTKENTILKSAFKIQHERQIEYENKSQELQHLKQLVSQYQEQLRTLEVNNYALAMHLKQAQQCNSFPGRFHPDVF 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1688 258 CDD CUE 39 74 - -
Dere12g1688 258 Pfam CUE domain 39 74 IPR003892 GO:0043130
Dere12g1688 258 MobiDBLite consensus disorder prediction 89 120 - -
Dere12g1688 258 Coils Coil 205 232 - -
Dere12g1688 258 ProSiteProfiles CUE domain profile. 36 82 IPR003892 GO:0043130
Dere12g1688 258 MobiDBLite consensus disorder prediction 105 120 - -
Dere12g1688 258 SUPERFAMILY UBA-like 38 80 IPR009060 GO:0005515
Dere12g1688 258 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 258 - -
Dere12g1688 258 Gene3D - 34 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1688 Dere-ChrDere12 29343876 29347407 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g1688 12 29343876 29347407 Dere11g1784 11 31736672 31741028 CCT
Dere12g1688 12 29343876 29347407 Dere12g1688 12 29343876 29347407 ECH