Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1784 ATGTCTGCTGCAGTGTGTGGAAGCAAGCGATCTTTCTTTGAAGACCTTCCTCCATCACCCCCAGTATCCAAGAGGCTTCGTTGTTCAACCTCGCCCATTCGTTTATCGGTTCCGAGTCTCATCGATAAGCTTCGGACTGTGTTTCCTCACATGGATGTCCAGGTCCTTGAGAGAGCACTCCAAGAATGTGGCAATGATATGGACACTGCCATCAAGAGCCTACATGAGCTTTGCTTGGGATCTGCCAACGAAAATTCTGTAACTGCTGAAGAATCAGAAGTTAATGTGGAAACAGGTAAATTGACAGATGATTTGGATGCTTCTGCTTCTGAGAATAAGATAGCTTCAAATAACCTTCCTGCGGATGGAGCAGAATGGGTTGACCTGTTTGTGAGAGAAATGACAAGTGCTACTAGTATTGATGATGCCAAAGCCCGTGCTGCTAGAATTCTGGAGGTTCTAGAAAAATCAATCTGTGAACGTGCTAGTGTGGAGGCAACACATGTAATTCAAAAGGAAAATATGGTGCTGAAGGAGCAAATTGAAGGGCTGATTAAGGAGAATACCATTCTTAAACAAGCAGTTAAAATTCAGCATGAACGACTTTCTGATTATGAGGATAAGAACCAAGAGTTGCAACATTTGAAGCAGTTGGTGTCTCAATACCAGGAGCAGTTGAGAACTCTTGAGTTGAATAATTATGCCTTGGCAATGCATTTGAAGCAGGCTCAACAGTGCAACACCTTTCCTGGGCGTTTCCCTCCTGATGTTTTCTAA 777 0.435 MSAAVCGSKRSFFEDLPPSPPVSKRLRCSTSPIRLSVPSLIDKLRTVFPHMDVQVLERALQECGNDMDTAIKSLHELCLGSANENSVTAEESEVNVETGKLTDDLDASASENKIASNNLPADGAEWVDLFVREMTSATSIDDAKARAARILEVLEKSICERASVEATHVIQKENMVLKEQIEGLIKENTILKQAVKIQHERLSDYEDKNQELQHLKQLVSQYQEQLRTLELNNYALAMHLKQAQQCNTFPGRFPPDVF 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1784 258 CDD CUE 39 74 - -
Dere11g1784 258 ProSiteProfiles CUE domain profile. 36 82 IPR003892 GO:0043130
Dere11g1784 258 Gene3D - 38 80 - -
Dere11g1784 258 SUPERFAMILY UBA-like 38 82 IPR009060 GO:0005515
Dere11g1784 258 Pfam CUE domain 38 74 IPR003892 GO:0043130
Dere11g1784 258 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 258 - -
Dere11g1784 258 Coils Coil 195 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1784 Dere-ChrDere11 31736672 31741028 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g1688 12 29343876 29347407 Dere11g1784 11 31736672 31741028 CCT
Dere11g1784 11 31736672 31741028 Dere11g1784 11 31736672 31741028 ECH