Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1638 ATGTGGCGAAGAATTGTCTCTGTTCAACTCAAGTCCTTAGCTACTCTCTCTTCTTCTCGTTCCCGATCTGCTTCTACGCCTACACGATTTGACATCGGTTCTCTGTTTGTCTCTCGTTCTTCCTTTGTTATTCCTCGATATTTCAGTTCTGCGGATACTGCGATCAGAAAGACGGTTGAGAATGTAATGCCTATAGCTACTGGCCATGAGCGCGAGGAGATTGAGGCTGAGCTTCAGGGAAAAAAGCTTCTGGATATAAACTTTCCCGAAGGTCCTTTTGGCACAAAGGAAGCTCCTGCTGTTATTAAGTCATACTATGACAAAAGGATAGTTGGATGCCCTGGAGGTGAAGGCGAGGATGAGCATGATGTTGTCTGGTTTTGGCTGGAGAAAGGCAAGCCTCATGAATGTCCAGTGTGCACACAGTATTTTGTGCTTGAAGTGGTAGGACCTGGTGGTCCACCTGACGGACATGGCGATGAGGACGACCATCATCATTGA 501 0.4691 MWRRIVSVQLKSLATLSSSRSRSASTPTRFDIGSLFVSRSSFVIPRYFSSADTAIRKTVENVMPIATGHEREEIEAELQGKKLLDINFPEGPFGTKEAPAVIKSYYDKRIVGCPGGEGEDEHDVVWFWLEKGKPHECPVCTQYFVLEVVGPGGPPDGHGDEDDHHH 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1638 166 Pfam Cytochrome c oxidase subunit Vb 63 152 IPR002124 GO:0005740|GO:0005751|GO:0006123
Dere12g1638 166 SUPERFAMILY Rubredoxin-like 55 152 - -
Dere12g1638 166 CDD Cyt_c_Oxidase_Vb 57 149 IPR002124 GO:0005740|GO:0005751|GO:0006123
Dere12g1638 166 Gene3D Cytochrome c oxidase, subunit Vb 56 149 IPR036972 GO:0005740|GO:0005751|GO:0006123
Dere12g1638 166 ProSiteProfiles Cytochrome c oxidase subunit Vb, zinc binding domain profile. 54 153 IPR002124 GO:0005740|GO:0005751|GO:0006123
Dere12g1638 166 PANTHER CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL 1 166 IPR002124 GO:0005740|GO:0005751|GO:0006123
Dere12g1638 166 FunFam Cytochrome c oxidase subunit Vb 55 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1638 Dere-ChrDere12 28880818 28883884 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g1638 12 28880818 28883884 Dere11g1739 11 31185613 31189158 CCT
Dere11g1739 11 31185613 31189158 Dere12g1638 12 28880818 28883884 ECH
Dere12g1638 12 28880818 28883884 Dere12g1638 12 28880818 28883884 ECH