Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g1428 ATGGCTTCAGTTGGTGCAGTCAAATTCTTGCTGTTCTTAGTTCTATGGCTCTTCAACGCTCCAACTCCTTCTCAAGGTGAGAAGAACAACGTGTATCAAAATGTCTACTCATTCATCAAAAGGGCAAGCTCATTCTCATCATCTTCATCAGTTTCAGGCACATGGAGCAATGATGGGTATGATTATATAGTAGTGGGAGGTGGAACTGCAGGGTGCCCTTTGGCTGCAACGCTATCTGAGAAATTCAGAGTTTTGGTGCTTGAAAGAGGGGGTGTCCCATTTAGCAATCCCAATGTGTCGTTAATGCAGAATTTTCACATTACCTTGGCGGACACTTCACCAACTTCACCTTCTCAATACTTCGTTTCAACCGATGGAGTCCTTAATGCAAGGGCTAGGGTTCTTGGTGGTGGTAGCTCCATTAATGCCGGCTTCTACAGCAGAGCAAGCTCAAGATATATAGAGAAAGTGGGGTGGGATGCGAAGGTGGTGAACGAGTCATATCCATGGGTAGAGAAGCGAATCGTGCACCGTCCAAACATTGCACCATGGCAGACAGCAGTGATGGATGGGCTTCTTGATGTGGGTGTGTCTCCTTTCAATGGCTTCACCTACGATCATGTTCATGGCACCAAGGTTGGTGGTACCATTTTCGACAGGTTTGGTCGCCGCCACAGTGCTGCTGAACTTCTTGCTTCTGGAAACCCTCGGAAGCTCACTGTTCTCGTCCATGCCACTGTCCAGAAGATTGTTTTTCACACCAGAGGAAAAAGGCCAAAAGCTGTGGGAGTAATTTTCAAAGATGAAAATGGGAAACAGCATGAGGCAGTTCTGAGAAATGAGCAGAGCGAGGTGATAGTGTCCAGTGGAGCACTAGGGACACCTCAATTGCTAATGCTGAGTGGAATTGGTCCTAAAGAAGAACTCCAAAACTGGAACATCCCAATGGTGCTTGACAACCCATATGTTGGTAAGGGCATGGCTGATAACCCCTTGAACACCATTTTTGTACCTTCTAAAAGGCCAGTGAAGCAGTCACTCATAGAAATTGTGGGGGTCACCGACTTGGGAGTGTACATTGAGGCTAGCAGTGGGTTTGGTCAGTCCAACGATAGCATTCACTGCCACCATGGTCTCTTGTCAGCTGAGATTGGGCAGCTCTCCACAATTCCTCCCGAGAAAAGATCAGCAGAAGCTGTTCAAGAGTATGTCAAAAGCAAGCGAGAAATACCAGTTGAAGCATTCAGGGGTGGCTTCATCTTGTCAAAAGTAGCGAGCCCTTGGTCAACTGGTGAGCTCAAGCTGATCAACACTAATGTAGAAGACAACCCTTCTGTGAGCTTCAACTATTTCAGCCACCCATATGATCTTCAACGTTGTGTTGAGGGGATTCGAATGGCAACTAAGGTTGTCCAGTCACAACGATTCACGAACTACACTTCGTGTGACACACAAAATACCGAGACACTTCTTAACCTTACGGTGAAGGCTAATGTCAACCTCGTACCCAAGCATGTCAATGACACAAAGTCACTAGAGCAGTTCTGCAGGGATACTGTAATCACTATTTGGCATTACCATGGTGGGTGCCATGTGGGAAAAGTGGTTGGCCCTGATTATAAGGTTCTTGGTGTTGATAGACTCCGTGTGGTGGATGGCTCAACGTTTACTGAATCACCCGGGACGAATCCTCAAGCCACTGTGATGATGATGGGCAGGTACATGGGACTGAAGATTTTGAGAGATAGGTTGGGGAAATCGGCTGGTATATAA 1773 0.4681 MASVGAVKFLLFLVLWLFNAPTPSQGEKNNVYQNVYSFIKRASSFSSSSSVSGTWSNDGYDYIVVGGGTAGCPLAATLSEKFRVLVLERGGVPFSNPNVSLMQNFHITLADTSPTSPSQYFVSTDGVLNARARVLGGGSSINAGFYSRASSRYIEKVGWDAKVVNESYPWVEKRIVHRPNIAPWQTAVMDGLLDVGVSPFNGFTYDHVHGTKVGGTIFDRFGRRHSAAELLASGNPRKLTVLVHATVQKIVFHTRGKRPKAVGVIFKDENGKQHEAVLRNEQSEVIVSSGALGTPQLLMLSGIGPKEELQNWNIPMVLDNPYVGKGMADNPLNTIFVPSKRPVKQSLIEIVGVTDLGVYIEASSGFGQSNDSIHCHHGLLSAEIGQLSTIPPEKRSAEAVQEYVKSKREIPVEAFRGGFILSKVASPWSTGELKLINTNVEDNPSVSFNYFSHPYDLQRCVEGIRMATKVVQSQRFTNYTSCDTQNTETLLNLTVKANVNLVPKHVNDTKSLEQFCRDTVITIWHYHGGCHVGKVVGPDYKVLGVDRLRVVDGSTFTESPGTNPQATVMMMGRYMGLKILRDRLGKSAGI 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g1428 590 ProSitePatterns GMC oxidoreductases signature 2. 290 304 IPR000172 GO:0016614|GO:0050660
Dere12g1428 590 SUPERFAMILY FAD/NAD(P)-binding domain 58 582 IPR036188 -
Dere12g1428 590 SUPERFAMILY FAD-linked reductases, C-terminal domain 327 529 - -
Dere12g1428 590 Gene3D - 177 522 - -
Dere12g1428 590 Pfam GMC oxidoreductase 60 331 IPR000172 GO:0016614|GO:0050660
Dere12g1428 590 Pfam GMC oxidoreductase 427 573 IPR007867 GO:0016614
Dere12g1428 590 Gene3D - 60 572 IPR036188 -
Dere12g1428 590 ProSitePatterns GMC oxidoreductases signature 1. 132 155 IPR000172 GO:0016614|GO:0050660
Dere12g1428 590 PANTHER OSJNBA0019K04.7 PROTEIN 20 584 - -
Dere12g1428 590 PIRSF Alcohol_oxidase 37 589 IPR012132 GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g1428 Dere-ChrDere12 26275185 26282142 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere12g1428 11 583 Miscellaneous Gene Families AT5G51950 49.483 0.0 556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g1428 12 26275185 26282142 Dere11g1524 11 28048210 28056070 CCT
Dere12g1428 12 26275185 26282142 Dere12g1428 12 26275185 26282142 ECH