Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g1524 ATGGCTTCAGTTGGTGCAGTCAACTTCTTGTTGTGCTTATTACTTCTGGGCCTCTTGAACTCTATCCCTCCTTGTCAAGGCAACAATCAGAAGTGGTATAACAAATACAAGTACCCATTTATCAGAAGGGCAAGCTCATTTTCATCTTCATCATCATCAACATCAACCACAATCAGCAACAATGCCTATGACTACATAATAGTAGGAGGTGGGACTGCAGGGTGCCCTTTGGCTGCAACACTGTCCCAGAACTTCAGGGTCTTGCTTCTTGAAAGAGGGGGTGTCCCCTTCAACAATCCAAATGTGTCATTTCTGGAGAATTTTCATATAACTTTGGCTGATACTTCACCATCCTCAGCTTCCCAATACTTCGTTTCCACAGATGGTGTCCTTAATGCCAGAGCTAGGGTTCTGGGTGGTGGTAGCTCCATTAATGCTGGCTTCTACACCAGAGCAAGCTCAAGGTTTATAGAGACACTGGGGTGGGATGGAAGGTTAGTGAACGAGTCATACCCATGGGTGGAGAAGCAAATAGTTCACCGTCCGAAGTTTTCATGGTGGCAAAGAGCGGTGAGGGACAGCCTTCTAGAAGCAGGAGTCTCTCCCTTCAACGGCTTCACATATGATCATATTTATGGCACCAAGCTCGGTGGTACCATTTTTGACAGATTCGGTCGCCGCCACACTGCTGCTGAACTTCTCGCTTCAGCTAACCCTCGCAAGCTCACTGTTCTCGTCTATGCCACCGTCCACAAGATTGTTTTTGATACCAGAGGTAAAAGGCCAAGAGCAGTAGGAGTTATCTTTAAGGATGAAAATGGGAAAACCCATCAGGCCATTCTTGGAAATGGAAGGCAGAGTGAAGTGATAGTGTCCTGTGGGGCAATTGGGACTCCTCAATTGCTAATGTTAAGTGGGATTGGCCCTAAACAGCAACTGCAAGACTTGAACATCCCATTGGTGTTTCACAACCCTTTTGTTGGAAAAGGAATGGCTGACAACCCCATGAACACCATTTTTGTTCCTTCCAGCAGGCCAGTTTATCAATCACTCATAGAGACTGTGGGTATTACTAAACGGGGTGTTTACATTGAGGCTAGCAGTGGGTTTAGTCAGTCCAATGACAGCATTCACTGCCACCATGGGATCTTGTCTGCTGAGATTGGCCAGCTCTCCACAATACCCCCCAAGCAAAGATCCCCAGAAGCTGTTCAAGCTTTTCTCAAGAACAAGCGAGACCTCCCAGTTGAAGCATTCAGGGGAGGCTTTATCTTGTCAAAAGTGGCCAACCCATGGTCCGTAGGTGAGCTCAAGTTAATCAACACCAATATAGAAGACAACCCTTCGGTCACCTTCAACTATTTCAGTCACCCCTATGATCTCCAACGTTGTGTTGAGGGAATCAGAATAGCCACTAAGGTTGTGCAGTCAGAGCACTTCACAAACTACACCATGTGTGACAGACAAACCACAGAGAAACTGCTGAATCTCAGTGTGAAGGCCAATGTGAACCTCATACCCAAGCACCTCAATGACACACAGTCACTAGAGCAGTTTTGCAGAGACACCGTGATCACAATCTGGCACTACCATGGTGGGTGCCATCTGGGGAAGGTGGTTAGTTCTGATTATAAGGTTCTTGGAGTTGACAGACTCCGTGTGGTGGATGGCTCAACATTTACAGAATCACCGGGGACTAATCCTCAAGCCACTGTCATGATGATGGGCAGGTATATGGGACTGAAGATTTTAAGAGATAGGTTGCGGAAATCAACTGGCATATAG 1785 0.4667 MASVGAVNFLLCLLLLGLLNSIPPCQGNNQKWYNKYKYPFIRRASSFSSSSSSTSTTISNNAYDYIIVGGGTAGCPLAATLSQNFRVLLLERGGVPFNNPNVSFLENFHITLADTSPSSASQYFVSTDGVLNARARVLGGGSSINAGFYTRASSRFIETLGWDGRLVNESYPWVEKQIVHRPKFSWWQRAVRDSLLEAGVSPFNGFTYDHIYGTKLGGTIFDRFGRRHTAAELLASANPRKLTVLVYATVHKIVFDTRGKRPRAVGVIFKDENGKTHQAILGNGRQSEVIVSCGAIGTPQLLMLSGIGPKQQLQDLNIPLVFHNPFVGKGMADNPMNTIFVPSSRPVYQSLIETVGITKRGVYIEASSGFSQSNDSIHCHHGILSAEIGQLSTIPPKQRSPEAVQAFLKNKRDLPVEAFRGGFILSKVANPWSVGELKLINTNIEDNPSVTFNYFSHPYDLQRCVEGIRIATKVVQSEHFTNYTMCDRQTTEKLLNLSVKANVNLIPKHLNDTQSLEQFCRDTVITIWHYHGGCHLGKVVSSDYKVLGVDRLRVVDGSTFTESPGTNPQATVMMMGRYMGLKILRDRLRKSTGI 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g1524 594 Gene3D - 180 526 - -
Dere11g1524 594 Pfam GMC oxidoreductase 63 155 IPR000172 GO:0016614|GO:0050660
Dere11g1524 594 Pfam GMC oxidoreductase 224 335 IPR000172 GO:0016614|GO:0050660
Dere11g1524 594 ProSitePatterns GMC oxidoreductases signature 2. 294 308 IPR000172 GO:0016614|GO:0050660
Dere11g1524 594 PIRSF Alcohol_oxidase 40 593 IPR012132 GO:0050660
Dere11g1524 594 SUPERFAMILY FAD/NAD(P)-binding domain 57 587 IPR036188 -
Dere11g1524 594 PANTHER OSJNBA0019K04.7 PROTEIN 21 588 - -
Dere11g1524 594 Pfam GMC oxidoreductase 431 577 IPR007867 GO:0016614
Dere11g1524 594 Gene3D - 63 576 IPR036188 -
Dere11g1524 594 SUPERFAMILY FAD-linked reductases, C-terminal domain 331 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g1524 Dere-ChrDere11 28048210 28056070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere11g1524 63 587 Miscellaneous Gene Families AT5G51950 54.614 0.0 560
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g1428 12 26275185 26282142 Dere11g1524 11 28048210 28056070 CCT