Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0434 ATGGCGCAACGTTCTCATGTACCGAAATTTGGCAATTGGGAAAGTGAAGAAAATGTTCCTTATACAGCTTTCTTTGACAAGGCCCGGAAAGGTCGAACTGGCACGAAGATGATTAATCCAAATGACCCTGAGGAAAATCCAGATTTAGTCCGTAATAATTCATCTTCGACTGACCAATCTCCTTCAAAACCCAGACCTAACTTGAAGGAGGCAGCTGGAAAGGGATCAGTGAAATCAAAATTTGAGTTACAGAAGAGCATGGATGCTGATACTAATGATTCCTTTGGCTCTCCAGCTCGTTCCGGAGGCCCTGGAGTAGGATCTGCTGATTCCCGTAGAAGACCTGCAAGACAAAGTGCTGGGTCTGAATACAGTATTGAACGTTCTCCCCTTCATCGCCAGGCAAGGACCCCAGGTAGAGATAGTCCCTCTTGGGAAGGAAAGAATTCCTATGACAGCAGCCAGGGTACACCAGGAAGATCCCGACTAAGGCCGGCTAATCGAAGCGATGAAACTCCTGATAGAGGTGCTGCTGTTCCCAAGTTTGGTGAGTGGGATGAGAATAATCCAGCATCAGCTGATGGCTATACACACATTTTCAACAAGGTGCGAGAGGAGAAACAGGGTGGGGGTGGACATGCGCCAGGCACCCCGACAAAGAGACCCTATGTGGTCCGAAACCAACCTGCTGATGACAAAGTCCAGAGTTGCTGCTTTGGATGGTGCAAAAAATAA 735 0.4789 MAQRSHVPKFGNWESEENVPYTAFFDKARKGRTGTKMINPNDPEENPDLVRNNSSSTDQSPSKPRPNLKEAAGKGSVKSKFELQKSMDADTNDSFGSPARSGGPGVGSADSRRRPARQSAGSEYSIERSPLHRQARTPGRDSPSWEGKNSYDSSQGTPGRSRLRPANRSDETPDRGAAVPKFGEWDENNPASADGYTHIFNKVREEKQGGGGHAPGTPTKRPYVVRNQPADDKVQSCCFGWCKK 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0434 244 MobiDBLite consensus disorder prediction 46 64 - -
Dere12g0434 244 MobiDBLite consensus disorder prediction 1 20 - -
Dere12g0434 244 MobiDBLite consensus disorder prediction 164 181 - -
Dere12g0434 244 MobiDBLite consensus disorder prediction 143 162 - -
Dere12g0434 244 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 173 208 IPR008700 -
Dere12g0434 244 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 6 228 IPR040387 -
Dere12g0434 244 MobiDBLite consensus disorder prediction 25 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0434 Dere-ChrDere12 7371187 7380811 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g0434 12 7371187 7380811 Dere11g0505 11 8462410 8470182 CCT