Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0505 ATGGCTCAACATTCACATGTACCTAAATTTGGCAATTGGGAAAGTGAAGAGAACGTTCCTTATACAGCTTTTTTTGACAAGGCAAGAAAAGGTCGAACTGGCTCAAAGATGATAAACCCAAATGATCCCGAGGAAAATTCAGATTTAGTCCTTGATAATTCATCCTCAGCTGACCTCCCGCCAACTAAATCCATAGTTGATTCAGACAATCAAGCTGGAAATGGATCAGGGAGATCAATGCTTGAGTTACAAAAGAGCAAGGAGGATGGTGATCCTAAGCCTTCTATTGACTCTGCAGCTCAGCACAACAGTGTTGGTAATAGAAGTGGCAGTGACTCTACACATCTTCATGGAGGCCACAGAGTTGGTTCTGCTGATACTCGTCGAAAACCTGCAAGACAAAGTACTGGGCCTGAGTACAGCATTGAACGTTCACCCCTTCATCGCCAGGCAAAGACCCCAGGCAGAGATAGTCCCTCCTGGGAAGGAAAGATTACCTACAGCAGCCATGGTACACCAGGAAGATCCCGACTAAGATCAGCTAATCAAGGCGATGAAAGTCCTGATAGAGGTGCTGCTGTTCCAAAATTTGGAGAGTGGGATGAGAGTGACCCCACAGCAGCTGAAAGCTACACTCACATTTTCAATAAAGTGAGGGAGGAGAGACAGGGAGCTGGACAAGCAACTGGCATGCCTTCTGAGAGACCATATGTTGTCCGGAAACAAGCTACCAATGACAAAGCCCAGATTTGCTGCTTTGGCTGGTGCAAATAA 774 0.4612 MAQHSHVPKFGNWESEENVPYTAFFDKARKGRTGSKMINPNDPEENSDLVLDNSSSADLPPTKSIVDSDNQAGNGSGRSMLELQKSKEDGDPKPSIDSAAQHNSVGNRSGSDSTHLHGGHRVGSADTRRKPARQSTGPEYSIERSPLHRQAKTPGRDSPSWEGKITYSSHGTPGRSRLRSANQGDESPDRGAAVPKFGEWDESDPTAAESYTHIFNKVREERQGAGQATGMPSERPYVVRKQATNDKAQICCFGWCK 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0505 257 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 6 251 IPR040387 -
Dere11g0505 257 MobiDBLite consensus disorder prediction 97 113 - -
Dere11g0505 257 MobiDBLite consensus disorder prediction 39 81 - -
Dere11g0505 257 MobiDBLite consensus disorder prediction 162 181 - -
Dere11g0505 257 MobiDBLite consensus disorder prediction 26 205 - -
Dere11g0505 257 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 188 223 IPR008700 -
Dere11g0505 257 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 3 32 IPR008700 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0505 Dere-ChrDere11 8462410 8470182 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g0434 12 7371187 7380811 Dere11g0505 11 8462410 8470182 CCT