Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0133 ATGGATCAGATATTGAACAAGGTGGGATCTTACTGGTTCAGCCGAAGGGCCAACAAGGAGATTGACTCTGTCGGTGACGATCTCAATTCTCTGTCAAACAGTATTGGAGGAGGAACAAAATGGTTGGTCAACAAATTAAAAGGAAAGATGCAAAAGCCATTAACAGATTTGCTTAAGGAGTATGATCTACCAATAGGAATCTTTCCTCGTGATACAACAAACTATGAATTTAACGAAGAGACAGGAAAACTTGTCGTTTACATTCCTCAAGTGTGTGAAGTAGGCTACAGGGATTCATCTGTCTTGCGCTTCTCCACCTCAGTGAGTGGTTATCTGGAGAAAGGAAAGCTTGCAGACGTAGAAGGAATGAAGACAAAGGTGTTGATCTGGGCAAAAGTGACTGCCATCTCATCCGAAGGATCCAAGCTCCATTTCACAGCTGGGATGAAGAAAACAAGGAGTAGGGATGCATATGAGGTTTCCAGAGACGGAGTAATTGTCGATAAATTCTAA 513 0.423 MDQILNKVGSYWFSRRANKEIDSVGDDLNSLSNSIGGGTKWLVNKLKGKMQKPLTDLLKEYDLPIGIFPRDTTNYEFNEETGKLVVYIPQVCEVGYRDSSVLRFSTSVSGYLEKGKLADVEGMKTKVLIWAKVTAISSEGSKLHFTAGMKKTRSRDAYEVSRDGVIVDKF 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0133 170 Pfam Protein of unknown function, DUF538 55 159 IPR007493 -
Dere12g0133 170 PANTHER T31J12.3 PROTEIN-RELATED 51 162 IPR007493 -
Dere12g0133 170 Gene3D - 32 170 IPR036758 -
Dere12g0133 170 SUPERFAMILY At5g01610-like 2 169 IPR036758 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0133 Dere-ChrDere12 1620554 1623467 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g0133 12 1620554 1623467 Dere11g0116 11 1791651 1794175 CCT
Dere12g0133 12 1620554 1623467 Dere12g0133 12 1620554 1623467 ECH