Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0116 ATGGATCAAGTTGCAAACGTGGTTGGAACATACTGGTTTAAGGATAAGGCTACAAAGGAGCTCGCTTCTGTCGGTAATGATATCAATTCACTCTCAAGTAGTATTGAAGGAGGAACGAAATGGTTGGTCAACAAAGTAAAAGGAAAGATGCAGAAGCCATTGCCAGAATTTCTGAAGGAGAATGATCTACCAATAGGAGTGTTTCCTCGGAATGCAACAAACTACGAGTTCAATGAAGAGAAGAAGAAACTCGTGGTTCACATCCCTGAGGTGTGTGAAGTAGGATACAAGGATTCTTCAGTGTTGCGTTTCGACACCACTGTAAGCGCTTTTCTGGAGAAAGGAAAGCTCTCAGAGATAGAGGGGATGAAGACGAAGATGCTGATTTGGATCAAAGTCACCAACATTGCTTCTGAAGGACCGTCCAAGCTCCAAGTCACTGCTGGCTTGAGGAAGACGAGGAGTAGAGAGGCTTATGAAGTTTCTAGAGATGGTGTTCACATAGACAAATTCTAA 516 0.4322 MDQVANVVGTYWFKDKATKELASVGNDINSLSSSIEGGTKWLVNKVKGKMQKPLPEFLKENDLPIGVFPRNATNYEFNEEKKKLVVHIPEVCEVGYKDSSVLRFDTTVSAFLEKGKLSEIEGMKTKMLIWIKVTNIASEGPSKLQVTAGLRKTRSREAYEVSRDGVHIDKF 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0116 171 Gene3D - 32 171 IPR036758 -
Dere11g0116 171 Pfam Protein of unknown function, DUF538 56 160 IPR007493 -
Dere11g0116 171 SUPERFAMILY At5g01610-like 3 171 IPR036758 -
Dere11g0116 171 PANTHER T31J12.3 PROTEIN-RELATED 51 163 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0116 Dere-ChrDere11 1791651 1794175 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g0133 12 1620554 1623467 Dere11g0116 11 1791651 1794175 CCT