Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere12g0100 ATGGAGAGCACTACGGAGAAAGAGGGAGATAGTCGGGTGCCACTTTCGGATGTGGTAGCTGATTGTGTTAAGCGGTGGTTTAGGGACACTCTTAAGGAGGCCAAGGCTGGGGATATCAACATGCAAGTGTTGGTAGGTCAGATGTATTGCAGTGGATATGGGGTTTCTAGAGATGCCCAGAAGGGAAAAATTTGGCTTACCAAGGCATCGAGGACTAGGTCTTCAGTTTGGAAAGTTGGTGACAAGCGTCCAGGTTATAATGCGAGTGATTCTGATTCTGATGAACTGAAGGAAAATTCTTAA 303 0.462 MESTTEKEGDSRVPLSDVVADCVKRWFRDTLKEAKAGDINMQVLVGQMYCSGYGVSRDAQKGKIWLTKASRTRSSVWKVGDKRPGYNASDSDSDELKENS 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere12g0100 100 SUPERFAMILY HCP-like 32 70 - -
Dere12g0100 100 PANTHER EXPRESSED PROTEIN 1 99 - -
Dere12g0100 100 MobiDBLite consensus disorder prediction 85 100 - -
Dere12g0100 100 MobiDBLite consensus disorder prediction 77 100 - -
Dere12g0100 100 Gene3D Tetratricopeptide repeat domain 19 84 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere12g0100 Dere-ChrDere12 1232845 1234252 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g0100 12 1232845 1234252 Dere11g0090 11 1481751 1483194 CCT
Dere12g0100 12 1232845 1234252 Dere12g0100 12 1232845 1234252 ECH