Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere11g0090 ATGGATAACAGAACGGAGAGAAAAAGGACCGGTCGTATGCCGCTGTCGGAGGTGGTGGCGGATTGTGTTAAGCGGTGGTTCAAGGATACATTGAAGGAGGCTAAAGCAGGGGATATCAACATGCAGGTGCTATTGGGTCAGATGTATTACAGCGGTTATGGGGTTCCCCGAGATGCCCAGATGGGAAGAATTTGGCTTACCAAAGCATCAAGGACTAGGTCTTCGGTTTGGAAAGTTAGTGATAAGCATCCAGGTTATAATGCAAGTGATTCTGATTCTGATGAATCGGAGGGCAACTCTTAA 303 0.4719 MDNRTERKRTGRMPLSEVVADCVKRWFKDTLKEAKAGDINMQVLLGQMYYSGYGVPRDAQMGRIWLTKASRTRSSVWKVSDKHPGYNASDSDSDESEGNS 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere11g0090 100 Gene3D Tetratricopeptide repeat domain 11 85 IPR011990 GO:0005515
Dere11g0090 100 SUPERFAMILY HCP-like 31 70 - -
Dere11g0090 100 MobiDBLite consensus disorder prediction 77 100 - -
Dere11g0090 100 PANTHER EXPRESSED PROTEIN 1 97 - -
Dere11g0090 100 SMART sel1 39 74 IPR006597 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere11g0090 Dere-ChrDere11 1481751 1483194 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere12g0100 12 1232845 1234252 Dere11g0090 11 1481751 1483194 CCT